RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 KRT12Q99456 494 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 DDX47Q9H0S4 455 aaKnown RBP8.63□□□□□ -1.03
USP6NL-203ENST00000443016 PRDM8Q9NQV8 689 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 HACD3Q9P035 362 aa8.63□□□□□ -1.03
USP6NL-203ENST00000443016 LOC285095A0A1B0GVY8 99 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 A8MU76 341 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ERVH48-1M5A8F1 160 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 KMOO15229 486 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ATXN7O15265 892 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 BUD23O43709 281 aaKnown RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 VEGFDO43915 354 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 VIPP01282 170 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 PRB1P04280 392 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 VCLP18206 1134 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 RBL1P28749 1068 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 COILP38432 576 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 DR1Q01658 176 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 SNX1Q13596 522 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 GLE1Q53GS7 698 aaKnown RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 TEX35Q5T0J7 233 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ITPRIPL1Q6GPH6 555 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 SYDE1Q6ZW31 735 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ADGRG6Q86SQ4 1221 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 MMGT1Q8N4V1 131 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 CCDC89Q8N998 374 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 SLC35B2Q8TB61 432 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 JPH3Q8WXH2 748 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 OXNAD1Q96HP4 312 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 MRGPRX2Q96LB1 330 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ZCCHC2Q9C0B9 1178 aaKnown RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 C10orf88Q9H8K7 445 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 FOXJ2Q9P0K8 574 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 NFKBIL1Q9UBC1 381 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 CPNE7Q9UBL6 633 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 KLHL3Q9UH77 587 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 R3HDM2Q9Y2K5 976 aaKnown RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 COL27A1Q8IZC6 1860 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 K7ENP7 123 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ANXA9O76027 345 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 THRAP10827 490 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 RPL10P27635 214 aaKnown RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 CSF2RBP32927 897 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 SPAM1P38567 509 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 TMEM115Q12893 351 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 PRPSAP1Q14558 356 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 PPP1R7Q15435 360 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 MANEAQ5SRI9 462 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 KIAA1614Q5VZ46 1190 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 INO80CQ6PI98 192 aaPredicted RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 KDELC1Q6UW63 502 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 FAM151BQ6UXP7 276 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ZFAND4Q86XD8 727 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ART4Q93070 314 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 LRRC45Q96CN5 670 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 FAM118BQ9BPY3 351 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 ASPSCR1Q9BZE9 553 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 RAB17Q9H0T7 212 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 IL26Q9NPH9 171 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 TMEM9Q9P0T7 183 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 PCYOX1Q9UHG3 505 aa8.62□□□□□ -1.03
USP6NL-203ENST00000443016 DRG1Q9Y295 367 aaKnown RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 TLN1Q9Y490 2541 aaKnown RBP8.62□□□□□ -1.03
USP6NL-203ENST00000443016 GLYATL1P3A0A0U1RQE8 302 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 FAM187AA6NFU0 413 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 C9orf172C9J069 976 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 STMND1H3BQB6 276 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 TK2O00142 265 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 NDC80O14777 642 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 CHUKO15111 745 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 STX7O15400 261 aaKnown RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 KCNN4O15554 427 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 PPFIA2O75334 1257 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 FGF3P11487 239 aaPredicted RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 ZNF7P17097 686 aaPredicted RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 IDSP22304 550 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 CD82P27701 267 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 CALRP27797 417 aaKnown RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 STIP1P31948 543 aaKnown RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 GEMP55040 296 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 C19orf57Q0VDD7 668 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 ZSCAN1Q8NBB4 408 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 LSM14AQ8ND56 463 aaKnown RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 BRSK1Q8TDC3 778 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 SLCO2A1Q92959 643 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 VPS35Q96QK1 796 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 TAAR9Q96RI9 348 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 SLC39A1Q9NY26 324 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 ACSL6Q9UKU0 697 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 AAR2Q9Y312 384 aaKnown RBP8.61□□□□□ -1.03
USP6NL-203ENST00000443016 C2orf81A6NN90 581 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 UGT1A9O60656 530 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 AGTP01019 485 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 UGT1A6P19224 532 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 UGT1A1P22309 533 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 UGT1A4P22310 534 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 AKT1P31749 480 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 UGT1A3P35503 534 aa8.61□□□□□ -1.03
USP6NL-203ENST00000443016 DRG2P55039 364 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms