RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KRT38O76015 456 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CDK14O94921 469 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 SERPINE1P05121 402 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PABPC4LP0CB38 370 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 RBMS1P29558 406 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 GNPDA1P46926 289 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 MESP2Q0VG99 397 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 RCN2Q14257 317 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC9B1Q4ZJI4 515 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 VWA5B1Q5TIE3 1220 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PMS2CLQ68D20 193 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 SDCCAG8Q86SQ7 713 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PHYKPLQ8IUZ5 450 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CNTN4Q8IWV2 1026 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 Q8N9G6 341 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PGAP3Q96FM1 320 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 P2RY11Q96G91 374 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 RBBP8Q99708 897 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZFYVE1Q9HBF4 777 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 UBAP1Q9NZ09 502 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ITM2BQ9Y287 266 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ANKRD6Q9Y2G4 727 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ACTL7AQ9Y615 435 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 AHCTF1Q8WYP5 2266 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 E5RI56 91 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 IFRD1O00458 451 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ACOT8O14734 319 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 FKBP6O75344 327 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 VIPP01282 170 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ARNTP27540 789 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 RABIFP47224 123 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 XIAPP98170 497 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ROR2Q01974 943 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 PRKAA1Q13131 559 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 STX3Q13277 289 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CAMK2GQ13555 558 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF423Q2M1K9 1284 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CYHR1Q6ZMK1 362 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 DHDDSQ86SQ9 333 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 LILRA2Q8N149 483 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 RAB42Q8N4Z0 105 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 NPWQ8N729 165 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 NUS1Q96E22 293 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLX1AQ9BQ83 275 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 FAM192AQ9GZU8 254 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 CDH19Q9H159 772 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 RAD18Q9NS91 495 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 C2orf42Q9NWW7 574 aa7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 INTS6Q9UL03 887 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-208ENST00000442054 MYO16Q9Y6X6 1858 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 NCOR2Q9Y618 2525 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ANTXRLA6NF34 631 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 RNF103O00237 685 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 SH3BP5O60239 455 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 GDF9O60383 454 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 GLRA3O75311 464 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 RECQL5O94762 991 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 POLBP06746 335 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 CISD3P0C7P0 127 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 PAMP19021 973 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 FDFT1P37268 417 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 LIMK2P53671 638 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ABCE1P61221 599 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 SEPT7Q16181 437 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 KIF19Q2TAC6 998 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 HLA-BQ31612 363 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 PIGGQ5H8A4 983 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 PELI3Q8N2H9 469 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 CNDP2Q96KP4 475 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 PREBQ9HCU5 417 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 TM9SF3Q9HD45 589 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 PCDH12Q9NPG4 1184 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 IL1RAPL1Q9NZN1 696 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 B4GALT6Q9UBX8 382 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 DCDC2Q9UHG0 476 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 SARDHQ9UL12 918 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 SPAARA0A1B0GVQ0 90 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 MATN2O00339 956 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ADAM23O75077 832 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 NDUFS3O75489 264 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ALPIP09923 528 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 MGAT1P26572 445 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 IRF9Q00978 393 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 APOFQ13790 326 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 SPIDRQ14159 915 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 CNPY1Q3B7I2 92 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 PTRHD1Q6GMV3 140 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 WDR75Q8IWA0 830 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 MARVELD2Q8N4S9 558 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 KDM1BQ8NB78 822 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 BTN2A2Q8WVV5 523 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF641Q96N77 438 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 VAT1Q99536 393 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 FAM117AQ9C073 453 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 YIPF3Q9GZM5 350 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 DUSP15Q9H1R2 295 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 C11orf16Q9NQ32 467 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 MARCOQ9UEW3 520 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 FZD4Q9ULV1 537 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms