RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 UGT1A5P35504 534 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 ARF5P84085 180 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 TBC1D25Q3MII6 688 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 FUT10Q6P4F1 479 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 GPR180Q86V85 440 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 ZFAND4Q86XD8 727 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 HID1Q8IV36 788 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 TBC1D21Q8IYX1 336 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 CARNMT1Q8N4J0 409 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 PACRGLQ8N7B6 248 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 C17orf80Q9BSJ5 609 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 LRRC3Q9BY71 257 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 BRINP2Q9C0B6 783 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 ADNPQ9H2P0 1102 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 CARS2Q9HA77 564 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 SMURF2Q9HAU4 748 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 NTN4Q9HB63 628 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 VAPAQ9P0L0 249 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 ZNHIT2Q9UHR6 403 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 KANSL1LA0AUZ9 987 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 OR7A17O14581 309 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 NR4A1P22736 598 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 CDH4P55283 916 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 EMX2Q04743 252 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 PIGFQ07326 219 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 MRPL58Q14197 206 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 ENPP6Q6UWR7 440 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 MBOAT1Q6ZNC8 495 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 MILR1Q7Z6M3 343 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 PTRH1Q86Y79 214 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 LRRC43Q8N309 656 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 DBF4BQ8NFT6 615 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 OR10A6Q8NH74 314 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 EGFL8Q99944 293 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 IKZF5Q9H5V7 419 aa13.36□□□□□ -0.27
HERPUD1-204ENST00000439977 SCN4AP35499 1836 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 C2orf78A6NCI8 922 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 CD160O95971 181 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 F11P03951 625 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 ACLYP53396 1101 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 GTDC1Q4AE62 458 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 SLC44A4Q53GD3 710 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 PTRHD1Q6GMV3 140 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 PATL1Q86TB9 770 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 KRTCAP2Q8N6L1 136 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 PDZD8Q8NEN9 1154 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 TNIP2Q8NFZ5 429 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 LKAAEAR1Q8TD35 194 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 BCL7CQ8WUZ0 217 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 TMBIM1Q969X1 311 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 ADGRE3Q9BY15 652 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 SLC30A1Q9Y6M5 507 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 U3KQV3 271 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 OR6C75A6NL08 312 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 KLK8O60259 260 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 ALBP02768 609 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 PAX3P23760 479 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 HMOX2P30519 316 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 SHMT2P34897 504 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 OR1D2P34982 312 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 CLCN7P51798 805 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 FOXM1Q08050 763 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 GTF2H2Q13888 395 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 AASDHQ4L235 1098 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 ALG1LQ6GMV1 187 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 GTF2H2CQ6P1K8 395 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 TXNDC11Q6PKC3 985 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 TRAF7Q6Q0C0 670 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 PHACTR4Q8IZ21 702 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 AURKBQ96GD4 344 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 NUSAP1Q9BXS6 441 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 NMRK2Q9NPI5 230 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 EXD2Q9NVH0 621 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 HACD3Q9P035 362 aa13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 IFT80Q9P2H3 777 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-204ENST00000439977 GREB1Q4ZG55 1949 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 H3BMQ9 156 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 TMEM189-UBE2V1I3L0A0 370 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 LSM1O15116 133 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 STC2O76061 302 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 B3GALT4O96024 378 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 ENO2P09104 434 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 FCGR1AP12314 374 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 IL7RP16871 459 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 PRKACGP22612 351 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 MTHFRP42898 656 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 FCGRTP55899 365 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 EEFSECP57772 596 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 MYBPC3Q14896 1274 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 PHKG1Q16816 387 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 FAM174BQ3ZCQ3 159 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 PDCD4Q53EL6 469 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 COQ5Q5HYK3 327 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 KCNJ9Q92806 393 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 THAP11Q96EK4 314 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 COG8Q96MW5 612 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 ZNF382Q96SR6 550 aa13.34□□□□□ -0.27
HERPUD1-204ENST00000439977 CGREF1Q99674 301 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms