RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 LRRC3Q9BY71 257 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SLIRPQ9GZT3 109 aaKnown RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 TRMT13Q9NUP7 481 aaKnown RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 ZNF639Q9UID6 485 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 AGO1Q9UL18 857 aaKnown RBP13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SNX8Q9Y5X2 465 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SBF1O95248 1867 aa13.22□□□□□ -0.29
ACTN1-204ENST00000438964 SMIM28A0A1B0GU29 152 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 ILVBLA1L0T0 632 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 SOCS7O14512 581 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 TFECO14948 347 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 GPR39O43194 453 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 MAFKO60675 156 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 S1PR4O95977 384 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 CNPP09543 421 aaKnown RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 CASP3P42574 277 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 GALNT3Q14435 633 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 NXNL2Q5VZ03 156 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 ARHGAP12Q8IWW6 846 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 TTC30BQ8N4P2 665 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 SMOQ99835 787 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 ZFP14Q9HCL3 533 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 EIF2B4Q9UI10 523 aaKnown RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 ZMYM5Q9UJ78 669 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 MOSPD1Q9UJG1 213 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 LEF1Q9UJU2 399 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 POLR3HQ9Y535 204 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 RLFQ13129 1914 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 NUAK1O60285 661 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 GABARAPO95166 117 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 LGALS2P05162 132 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 ABCB1P08183 1280 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 CXCR2P25025 360 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 EIF2DP41214 584 aaKnown RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 OAZ1P54368 228 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 DAOAP59103 153 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 PTPRRQ15256 657 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 CCDC58Q4VC31 144 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 ANKRD46Q86W74 232 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 UNC93AQ86WB7 457 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 CRYBG2Q8N1P7 616 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 UBE2J2Q8N2K1 259 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 FBXO39Q8N4B4 442 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 LILRB4Q8NHJ6 448 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 CALML6Q8TD86 181 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 OSBPL10Q9BXB5 764 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 YTHDF1Q9BYJ9 559 aaKnown RBP13.21□□□□□ -0.29
ACTN1-204ENST00000438964 AS3MTQ9HBK9 375 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 ERAP1Q9NZ08 941 aa13.21□□□□□ -0.29
ACTN1-204ENST00000438964 NCAM2O15394 837 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 ANXA9O76027 345 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 CDKN1CP49918 316 aaPredicted RBP13.21□□□□□ -0.3
ACTN1-204ENST00000438964 SLC10A7Q0GE19 358 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 KIAA0930Q6ICG6 404 aaPredicted RBP13.21□□□□□ -0.3
ACTN1-204ENST00000438964 LYPD8Q6UX82 237 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 PTRH1Q86Y79 214 aaKnown RBP13.21□□□□□ -0.3
ACTN1-204ENST00000438964 ZMIZ2Q8NF64 920 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 OR2T12Q8NG77 320 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 S100ZQ8WXG8 99 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 ROGDIQ9GZN7 287 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 DCSTAMPQ9H295 470 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 CRTAC1Q9NQ79 661 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 ERVK13-1Q9NX77 482 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 PIN4Q9Y237 131 aaKnown RBP13.21□□□□□ -0.3
ACTN1-204ENST00000438964 ACTL7AQ9Y615 435 aa13.21□□□□□ -0.3
ACTN1-204ENST00000438964 A0A096LPI6 279 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 EFCAB9A8MZ26 197 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 BTN3A1O00481 513 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 FFAR3O14843 346 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 GPR42O15529 346 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 PAPSS2O95340 614 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 C21orf33P30042 268 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 TUFMP49411 452 aaKnown RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 CLCN5P51795 746 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 TIAL1Q01085 375 aaKnown RBP eCLIP13.2□□□□□ -0.34e-6■■■□□ 18.3
ACTN1-204ENST00000438964 RANBP10Q6VN20 620 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 BEND5Q7L4P6 421 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 PLPPR4Q7Z2D5 763 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 GALNT13Q8IUC8 556 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 HASPINQ8TF76 798 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 CNDP2Q96KP4 475 aaKnown RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 SPATC1LQ9H0A9 340 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 TXNRD2Q9NNW7 524 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 SLC6A13Q9NSD5 602 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 AIG1Q9NVV5 245 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 hCG_2039718K7EN88 272 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 M0R129 80 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 HOXC11O43248 304 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 GAS2O43903 313 aaKnown RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 UPK1BO75841 260 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 CD4P01730 458 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 HSMCR30P0CW71 290 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 MYCLP1P12525 358 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 AZGP1P25311 298 aaKnown RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 SERPINB10P48595 397 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 ATP4BP51164 291 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 HNRNPFP52597 415 aaKnown RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 PPP2R2BQ00005 443 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms