RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 FNDC5Q8NAU1 212 aa9.35□□□□□ -0.91
CUX1-206ENST00000437600 CD200R1Q8TD46 325 aa9.35□□□□□ -0.91
CUX1-206ENST00000437600 LINC00597Q9H2U6 94 aa9.35□□□□□ -0.91
CUX1-206ENST00000437600 IGFLR1Q9H665 355 aa9.35□□□□□ -0.91
CUX1-206ENST00000437600 INTS7Q9NVH2 962 aaKnown RBP9.35□□□□□ -0.91
CUX1-206ENST00000437600 CMTM6Q9NX76 183 aa9.35□□□□□ -0.91
CUX1-206ENST00000437600 EPS15L1Q9UBC2 864 aa9.35□□□□□ -0.91
CUX1-206ENST00000437600 CROCCQ5TZA2 2017 aa9.35□□□□□ -0.91
CUX1-206ENST00000437600 CHD5Q8TDI0 1954 aa9.35□□□□□ -0.91
CUX1-206ENST00000437600 C1orf232A0A0U1RR37 186 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 PRSS51A0A1B0GVH4 220 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 TYW5A2RUC4 315 aaKnown RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 MTX2O75431 263 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 GLUD1P00367 558 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ADH1AP07327 375 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 GNAO1P09471 354 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ZNF26P17031 533 aaPredicted RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 IL12AP29459 219 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 HSPA7P48741 367 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CHN2P52757 468 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CDH15P55291 814 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ERVPABLB-1P60509 514 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 MYBPC1Q00872 1141 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 LCP2Q13094 533 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 GPM6BQ13491 265 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 LETMD1Q6P1Q0 360 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 IL27RAQ6UWB1 636 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CHRDL2Q6WN34 429 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 DET1Q7L5Y6 550 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 DHFR2Q86XF0 187 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 PHYKPLQ8IUZ5 450 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 METTL6Q8TCB7 284 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 DLG3Q92796 817 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 DTNBP1Q96EV8 351 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 GDF15Q99988 308 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ASB8Q9H765 288 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 SYTL2Q9HCH5 934 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ASAH2Q9NR71 780 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 C6orf203Q9P0P8 240 aaPredicted RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 CD84Q9UIB8 345 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 LEFTY2O00292 366 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 SOCS2O14508 198 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CASQ2O14958 399 aaPredicted RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 INPP4BO15327 924 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 KERAO60938 352 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CAPN1P07384 714 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 PCNAP12004 261 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 LBPP18428 481 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 RHDQ02161 417 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 LMAN2Q12907 356 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CNPY1Q3B7I2 92 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 PUS10Q3MIT2 529 aaKnown RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 PABPC1LQ4VXU2 614 aaKnown RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 LIN52Q52LA3 116 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 SLC2A7Q6PXP3 512 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 Q6ZSR9 355 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 MILR1Q7Z6M3 343 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 TMEM25Q86YD3 366 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 MIER2Q8N344 545 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CLHC1Q8NHS4 586 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 SKA2Q8WVK7 121 aaPredicted RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 PPM1MQ96MI6 270 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 TFB2MQ9H5Q4 396 aaKnown RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 ZFP14Q9HCL3 533 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ABCB8Q9NUT2 735 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CD300AQ9UGN4 299 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 INTS6Q9UL03 887 aaKnown RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 HEMK1Q9Y5R4 338 aaPredicted RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 SLC30A1Q9Y6M5 507 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 DMDP11532 3685 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ARHGAP10A1A4S6 786 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 SYNCRIPO60506 623 aaKnown RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 SH3BGRLO75368 114 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 VPS26AO75436 327 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 RSL1D1O76021 490 aaKnown RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 SLC25A14O95258 325 aaPredicted RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 PRAMEF1O95521 474 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CYBBP04839 570 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 SLC6A2P23975 617 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 HMGCS1Q01581 520 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 GSTA3Q16772 222 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 PHKG1Q16816 387 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 TYSND1Q2T9J0 566 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 RFTN2Q52LD8 501 aaPredicted RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 PTRHD1Q6GMV3 140 aaKnown RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 LILRA6Q6PI73 481 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 AFTPHQ6ULP2 937 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ZSWIM9Q86XI8 627 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 HJURPQ8NCD3 748 aaPredicted RBP9.34□□□□□ -0.91
CUX1-206ENST00000437600 OR10Q1Q8NGQ4 319 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 GPR150Q8NGU9 434 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 SORCS1Q8WY21 1168 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ZSWIM3Q96MP5 696 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 ADGRE3Q9BY15 652 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 LRRC3Q9BY71 257 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 CAAP1Q9H8G2 361 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 SLC28A3Q9HAS3 691 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 TMEM181Q9P2C4 612 aa9.34□□□□□ -0.91
CUX1-206ENST00000437600 LSM7Q9UK45 103 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms