RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 UBP1Q9NZI7 540 aa17.88■□□□□ 0.45
UPK3BP1-201ENST00000428678 LRRD1A4D1F6 860 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 A6NL46 340 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 ZNF185O15231 689 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 CEACAM4O75871 244 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 TMEM63AO94886 807 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 ZBTB11O95625 1053 aaPredicted RBP17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 SERPINC1P01008 464 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 MTHFD1P11586 935 aaKnown RBP17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 COL8A1P27658 744 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 ARCN1P48444 511 aaKnown RBP17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 CTSCP53634 463 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 GSDMDP57764 484 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 NFE2L1Q14494 772 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 PDK1Q15118 436 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 FAM69BQ5VUD6 431 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 SLC6A19Q695T7 634 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 B4GALNT4Q76KP1 1039 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 MAMDC2Q7Z304 686 aaPredicted RBP17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 RHOT1Q8IXI2 618 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 ADAMTS17Q8TE56 1095 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 CPT1BQ92523 772 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 SYN2Q92777 582 aaPredicted RBP17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 TADA1Q96BN2 335 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 NUDT9Q9BW91 350 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 GLOD4Q9HC38 313 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 IL26Q9NPH9 171 aa17.87■□□□□ 0.45
UPK3BP1-201ENST00000428678 SSU72P8A0A1W2PR75 194 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 OR6C74A6NCV1 312 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 OR2AG2A6NM03 316 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 APOL1O14791 398 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 PPP1R12AO14974 1030 aaPredicted RBP17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 DDX3YO15523 660 aaKnown RBP17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 GPR39O43194 453 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 UGT1A9O60656 530 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 UGT1A6P19224 532 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 UGT1A1P22309 533 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 UGT1A4P22310 534 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 VARSP26640 1264 aaKnown RBP17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 NR1I3Q14994 352 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 NOMO1Q15155 1222 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 SLC14A2Q15849 920 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 PPP2R5EQ16537 467 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 LDLRAP1Q5SW96 308 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 PRAMEF17Q5VTA0 474 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 LCN10Q6JVE6 187 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 DUS1LQ6P1R4 473 aaKnown RBP17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 FBXO38Q6PIJ6 1188 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 TMEM220Q6QAJ8 160 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 NPNTQ6UXI9 565 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 FAM151BQ6UXP7 276 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 ZNF517Q6ZMY9 492 aaPredicted RBP17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 CLIP3Q96DZ5 547 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 GBP4Q96PP9 640 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 TLR10Q9BXR5 811 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 UGT1A7Q9HAW7 530 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 UGT1A10Q9HAW8 530 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 UGT1A8Q9HAW9 530 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 FANCEQ9HB96 536 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 GPR83Q9NYM4 423 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 UVRAGQ9P2Y5 699 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 TCFL5Q9UL49 500 aa17.86■□□□□ 0.45
UPK3BP1-201ENST00000428678 A0A0A6YYK5 440 aaPredicted RBP17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 A0A1W2PQJ5 194 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 MEN1O00255 615 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 RAB40ALP0C0E4 278 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 HMGCLP35914 325 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 SPAM1P38567 509 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 KPNA2P52292 529 aaKnown RBP17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 ITGA1P56199 1179 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 PLEKHS1Q5SXH7 462 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 HPS6Q86YV9 775 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 DSELQ8IZU8 1212 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 RBMXL3Q8N7X1 1067 aaKnown RBP17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 CPLX3Q8WVH0 158 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 PNPLA2Q96AD5 504 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 C12orf66Q96MD2 445 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 PPM1MQ96MI6 270 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 LRFN5Q96NI6 719 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 MAK16Q9BXY0 300 aaKnown RBP17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 NLNQ9BYT8 704 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 WWP1Q9H0M0 922 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 LATS2Q9NRM7 1088 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 PIKFYVEQ9Y2I7 2098 aa17.85■□□□□ 0.45
UPK3BP1-201ENST00000428678 KRT86O43790 486 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 AKT1P31749 480 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 DCTP40126 519 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 VAV2P52735 878 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 ZBED6P86452 979 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 ABRQ12979 859 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 RAPSNQ13702 412 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 FNBP1LQ5T0N5 605 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 GPRC6AQ5T6X5 926 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 ZDHHC20Q5W0Z9 365 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 METRNLQ641Q3 311 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 SLC9A4Q6AI14 798 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 MED25Q71SY5 747 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 CARFQ8N187 725 aa17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 TMEM102Q8N9M5 508 aaPredicted RBP17.84■□□□□ 0.45
UPK3BP1-201ENST00000428678 DDHD1Q8NEL9 900 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms