RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 AAR2Q9Y312 384 aaKnown RBP12.73□□□□□ -0.37
VRK3-203ENST00000424804 MED13Q9UHV7 2174 aa12.73□□□□□ -0.37
VRK3-203ENST00000424804 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
VRK3-203ENST00000424804 CLEC18AA5D8T8 446 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 OR52A4PA6NMU1 304 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 K7EM74 188 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 TOX3O15405 576 aaPredicted RBP12.72□□□□□ -0.37
VRK3-203ENST00000424804 VEGFDO43915 354 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 CEP104O60308 925 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 UBXN7O94888 489 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 IFNB1P01574 187 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 PRKAR1AP10644 381 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 SPTBP11277 2137 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 RPL10P27635 214 aaKnown RBP12.72□□□□□ -0.37
VRK3-203ENST00000424804 CCR10P46092 362 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 PPP1CAP62136 330 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 TMEM115Q12893 351 aaPredicted RBP12.72□□□□□ -0.37
VRK3-203ENST00000424804 CLEC18BQ6UXF7 455 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 PHYKPLQ8IUZ5 450 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 CLEC18CQ8NCF0 446 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 GDAP1Q8TB36 358 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 DTX3LQ8TDB6 740 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 ABHD17AQ96GS6 310 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 SRPK1Q96SB4 655 aaKnown RBP12.72□□□□□ -0.37
VRK3-203ENST00000424804 TBL1YQ9BQ87 522 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 GORASP1Q9BQQ3 440 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 OSGEPL1Q9H4B0 414 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 ZNF768Q9H5H4 540 aaKnown RBP12.72□□□□□ -0.37
VRK3-203ENST00000424804 STN1Q9H668 368 aaKnown RBP12.72□□□□□ -0.37
VRK3-203ENST00000424804 IL26Q9NPH9 171 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 RAD18Q9NS91 495 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 TRMT1Q9NXH9 659 aaKnown RBP12.72□□□□□ -0.37
VRK3-203ENST00000424804 IL17CQ9P0M4 197 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 EPHA6Q9UF33 1036 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 DNAJC16Q9Y2G8 782 aa12.72□□□□□ -0.37
VRK3-203ENST00000424804 C5orf60A6NFR6 353 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 GPR39O43194 453 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 UGT1A9O60656 530 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 ZNF189O75820 626 aaPredicted RBP12.71□□□□□ -0.37
VRK3-203ENST00000424804 CDK14O94921 469 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 TIAF1O95411 115 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 VIPP01282 170 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 EPOP01588 193 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 FGF5P12034 268 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 UGT1A6P19224 532 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 UGT1A1P22309 533 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 UGT1A4P22310 534 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 HMGCLP35914 325 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 LMAN1P49257 510 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 PPM1FP49593 454 aaPredicted RBP12.71□□□□□ -0.37
VRK3-203ENST00000424804 SEPHS1P49903 392 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 CTSCP53634 463 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 DRG2P55039 364 aaKnown RBP12.71□□□□□ -0.37
VRK3-203ENST00000424804 TMPRSS15P98073 1019 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 GPR18Q14330 331 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 PTPRCAPQ14761 206 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 SEPT7Q16181 437 aaKnown RBP12.71□□□□□ -0.37
VRK3-203ENST00000424804 IGFBP7Q16270 282 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 DEFB109BQ30KR1 87 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 FAM151BQ6UXP7 276 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 FAM83HQ6ZRV2 1179 aaPredicted RBP12.71□□□□□ -0.37
VRK3-203ENST00000424804 ZNF662Q6ZS27 426 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 PRSS42Q7Z5A4 293 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 AVL9Q8NBF6 648 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 SLC35B2Q8TB61 432 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 STARD8Q92502 1023 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 TGM7Q96PF1 710 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 RAB33BQ9H082 229 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 TRIT1Q9H3H1 467 aaKnown RBP12.71□□□□□ -0.37
VRK3-203ENST00000424804 AKIRIN1Q9H9L7 192 aaPredicted RBP12.71□□□□□ -0.37
VRK3-203ENST00000424804 UGT1A7Q9HAW7 530 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 UGT1A10Q9HAW8 530 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 UGT1A8Q9HAW9 530 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 ZNF71Q9NQZ8 489 aaPredicted RBP12.71□□□□□ -0.37
VRK3-203ENST00000424804 HACD3Q9P035 362 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 PKP3Q9Y446 797 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 RPS6KL1Q9Y6S9 549 aa12.71□□□□□ -0.37
VRK3-203ENST00000424804 USP9YO00507 2555 aaPredicted RBP12.7□□□□□ -0.38
VRK3-203ENST00000424804 E7EVH7 732 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 STX7O15400 261 aaKnown RBP12.7□□□□□ -0.38
VRK3-203ENST00000424804 ZSCAN12O43309 604 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 LIASO43766 372 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 METTL18O95568 372 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 FGGP02679 453 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 SPAM1P38567 509 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 CASRP41180 1078 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 CAPZBP47756 277 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 FOXK1P85037 733 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 DMPKQ09013 629 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 LAMB3Q13751 1172 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 SEPT6Q14141 434 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 CHRNA6Q15825 494 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 LONRF2Q1L5Z9 754 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 INSCQ1MX18 579 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 PARP6Q2NL67 630 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 PRUNE1Q86TP1 453 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 TMEM135Q86UB9 458 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 ESX1Q8N693 406 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 CCDC89Q8N998 374 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 RASGEF1AQ8N9B8 481 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms