RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SLC17A8Q8NDX2 589 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 OR52N1Q8NH53 320 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 UBA3Q8TBC4 463 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 HEXDCQ8WVB3 486 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 POMGNT1Q8WZA1 660 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 RPL36ALQ969Q0 106 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 NT5C3BQ969T7 300 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 FKBP10Q96AY3 582 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 RHBDF1Q96CC6 855 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 HSPBAP1Q96EW2 488 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 CCDC17Q96LX7 622 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 NSMCE2Q96MF7 247 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 GBP5Q96PP8 586 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 RANBP9Q96S59 729 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 SORBS1Q9BX66 1292 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 ANKRD2Q9GZV1 360 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TMEM245Q9H330 911 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 RIMS4Q9H426 269 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 FAM204AQ9H8W3 233 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 TMEM8AQ9HCN3 771 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 IL26Q9NPH9 171 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 SERTAD4Q9NUC0 356 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 VSX1Q9NZR4 365 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 PSMC3IPQ9P2W1 217 aaPredicted RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 CPNE7Q9UBL6 633 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 LIMA1Q9UHB6 759 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 BTBD3Q9Y2F9 522 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MRPS2Q9Y399 296 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 SAMHD1Q9Y3Z3 626 aaKnown RBP2.86□□□□□ -1.95
PMS1-209ENST00000424059 PCDHGB2Q9Y5G2 931 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 SOGA1O94964 1423 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 MIA2Q96PC5 1412 aa2.86□□□□□ -1.95
PMS1-209ENST00000424059 PCDH11XQ9BZA7 1347 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PCDH11YQ9BZA8 1340 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ZNF644Q9H582 1327 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 CCDC154A6NI56 674 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ATP6V1G2-DDX39BF2Z307 99 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 POLRMTO00411 1230 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 ATP2A1O14983 1001 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 HTRA2O43464 458 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 AP1G1O43747 822 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 EXOC3O60645 756 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 JRKO75564 520 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 BEST1O76090 585 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CDK14O94921 469 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PNPP00491 289 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 LIPFP07098 398 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 FHP07954 510 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ITGA2BP08514 1039 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GNAI3P08754 354 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CHRM5P08912 532 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 CNPP09543 421 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 SBK3P0C264 359 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 IL1R1P14778 569 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ITGAXP20702 1163 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GSTM2P28161 218 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GTF2H1P32780 548 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ARHGAP25P42331 645 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PRCPP42785 496 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 GABRB2P47870 512 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PCYT1AP49585 367 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 NT5C2P49902 561 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CCNG1P51959 295 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 IST1P53990 364 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ATXN3P54252 364 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 CASP6P55212 293 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CDH6P55285 790 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 POLE2P56282 527 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 TFF2Q03403 129 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 DRP2Q13474 957 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 DDX39BQ13838 428 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 CAPRIN1Q14444 709 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 SEC23BQ15437 767 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ACCSLQ4AC99 568 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 LACTB2Q53H82 288 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 ANKRD20A8PQ5CZ79 823 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ZNF618Q5T7W0 954 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 NAA35Q5VZE5 725 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SLC9A4Q6AI14 798 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SULT6B1Q6IMI4 303 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 PRMT9Q6P2P2 845 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SLC36A4Q6YBV0 504 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 STOX1Q6ZVD7 989 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 TRMT10CQ7L0Y3 403 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 WDR53Q7Z5U6 358 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 TAF8Q7Z7C8 310 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 USP37Q86T82 979 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 FAM217AQ8IXS0 508 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 SFRP1Q8N474 314 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 OR8J2Q8NGG1 315 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 OR13C2Q8NGS9 318 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CCDC12Q8WUD4 166 aaPredicted RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 CPT1BQ92523 772 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 MAGED4Q96JG8 741 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 CLPTM1LQ96KA5 538 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ZNF570Q96NI8 536 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 QRFPRQ96P65 431 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 BBS4Q96RK4 519 aa2.85□□□□□ -1.95
PMS1-209ENST00000424059 ACO2Q99798 780 aaKnown RBP2.85□□□□□ -1.95
PMS1-209ENST00000424059 ADGRE3Q9BY15 652 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms