RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SKIDA1Q1XH10 827 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 BCL7AQ4VC05 210 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 KIAA1614Q5VZ46 1190 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 DRICH1Q6PGQ1 229 aaPredicted RBP21.48■■□□□ 1.03
TRAF4-204ENST00000422344 PRUNE1Q86TP1 453 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 PLXDC1Q8IUK5 500 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 ANP32BQ92688 251 aaKnown RBP21.48■■□□□ 1.03
TRAF4-204ENST00000422344 HOMER3Q9NSC5 361 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 FAM8A1Q9UBU6 413 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 KLHL3Q9UH77 587 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 PSMD13Q9UNM6 376 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 DRG1Q9Y295 367 aaKnown RBP21.48■■□□□ 1.03
TRAF4-204ENST00000422344 WDR37Q9Y2I8 494 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 SSUH2Q9Y2M2 353 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 MAST4O15021 2626 aa21.48■■□□□ 1.03
TRAF4-204ENST00000422344 PRAMEF33A0A0G2JMD5 474 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 CCDC78A2IDD5 438 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 A8MU76 341 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 B8ZZF3 427 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 H7C0S8 307 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 PRAMEF10O60809 474 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 UBXN7O94888 489 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 SUN1O94901 812 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 APRTP07741 180 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 CCL4P13236 92 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 CACNG1Q06432 222 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 CLCA4Q14CN2 919 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 C4orf22Q6V702 233 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 FAM83HQ6ZRV2 1179 aaPredicted RBP21.47■■□□□ 1.03
TRAF4-204ENST00000422344 FAM129CQ86XR2 697 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 CDKN2AIPNLQ96HQ2 116 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 SLC40A1Q9NP59 571 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 ZDHHC3Q9NYG2 299 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 PDP2Q9P2J9 529 aa21.47■■□□□ 1.03
TRAF4-204ENST00000422344 HEATR9A2RTY3 570 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 PYCARD-AS1I3L0S3 204 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 K7ENP7 123 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 SLC35G4P0C7Q5 338 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 ATP1B2P14415 290 aaPredicted RBP21.46■■□□□ 1.03
TRAF4-204ENST00000422344 TYRP1P17643 537 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 GPR18Q14330 331 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 CCDC38Q502W7 563 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 METRNLQ641Q3 311 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 INO80CQ6PI98 192 aaPredicted RBP21.46■■□□□ 1.03
TRAF4-204ENST00000422344 SERPINA9Q86WD7 417 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 OR2L2Q8NH16 312 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 NAT14Q8WUY8 206 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 TAAR9Q96RI9 348 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 B3GNT4Q9C0J1 378 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 VPS37BQ9H9H4 285 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 IMP3Q9NV31 184 aaKnown RBP21.46■■□□□ 1.03
TRAF4-204ENST00000422344 ACSL6Q9UKU0 697 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 ACSL5Q9ULC5 683 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 JRKLQ9Y4A0 524 aa21.46■■□□□ 1.03
TRAF4-204ENST00000422344 MROH6A6NGR9 719 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 EFCAB7A8K855 629 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 ZSCAN12O43309 604 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 ZSCAN5DPP0CG00 497 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 FGF3P11487 239 aaPredicted RBP21.45■■□□□ 1.02
TRAF4-204ENST00000422344 MSNP26038 577 aaKnown RBP21.45■■□□□ 1.02
TRAF4-204ENST00000422344 ACRV1P26436 265 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 CD82P27701 267 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 RPL22P35268 128 aaKnown RBP21.45■■□□□ 1.02
TRAF4-204ENST00000422344 PRLHRP49683 370 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 BASP1P80723 227 aaKnown RBP21.45■■□□□ 1.02
TRAF4-204ENST00000422344 CLN3Q13286 438 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 RPE65Q16518 533 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 CCDC81Q6ZN84 652 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 GLIS1Q8NBF1 620 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.45■■□□□ 1.028e-6■■■□□ 18.3
TRAF4-204ENST00000422344 LINC00615Q96LM1 132 aaPredicted RBP21.45■■□□□ 1.02
TRAF4-204ENST00000422344 WWP1Q9H0M0 922 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 SLC39A1Q9NY26 324 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 FOXJ2Q9P0K8 574 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 PCDHB11Q9Y5F2 797 aa21.45■■□□□ 1.02
TRAF4-204ENST00000422344 TRBV5-4A0A0C4DH59 114 aa21.44■■□□□ 1.02
TRAF4-204ENST00000422344 C9orf172C9J069 976 aa21.44■■□□□ 1.02
TRAF4-204ENST00000422344 LIPCP11150 499 aa21.44■■□□□ 1.02
TRAF4-204ENST00000422344 CDKN1CP49918 316 aaPredicted RBP21.44■■□□□ 1.02
TRAF4-204ENST00000422344 PLCL1Q15111 1095 aa21.44■■□□□ 1.02
TRAF4-204ENST00000422344 CFAP206Q8IYR0 622 aa21.44■■□□□ 1.02
TRAF4-204ENST00000422344 HM13Q8TCT9 377 aa21.44■■□□□ 1.02
TRAF4-204ENST00000422344 ART4Q93070 314 aa21.44■■□□□ 1.02
TRAF4-204ENST00000422344 MED8Q96G25 268 aa21.44■■□□□ 1.02
TRAF4-204ENST00000422344 MN1Q10571 1320 aaPredicted RBP21.44■■□□□ 1.02
TRAF4-204ENST00000422344 B4E171 279 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 POLBP06746 335 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 MTHFD1P11586 935 aaKnown RBP21.43■■□□□ 1.02
TRAF4-204ENST00000422344 ADRA1DP25100 572 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 TSPAN7P41732 249 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 GRIA1P42261 906 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 KCNJ1P48048 391 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 RAB15P59190 212 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 GSE1Q14687 1217 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 ZNF449Q6P9G9 518 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 KLHL35Q6PF15 583 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 NLRP9Q7RTR0 991 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 ARHGAP22Q7Z5H3 698 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 ZFAND4Q86XD8 727 aa21.43■■□□□ 1.02
TRAF4-204ENST00000422344 PPHLN1Q8NEY8 458 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms