RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 NAT9Q9BTE0 207 aa18.29■□□□□ 0.52
PTCD3-204ENST00000418628 TMEM121BQ9BXQ6 578 aaPredicted RBP18.29■□□□□ 0.52
PTCD3-204ENST00000418628 COG4Q9H9E3 785 aa18.29■□□□□ 0.52
PTCD3-204ENST00000418628 UCK1Q9HA47 277 aa18.29■□□□□ 0.52
PTCD3-204ENST00000418628 ANAPC5Q9UJX4 755 aa18.29■□□□□ 0.52
PTCD3-204ENST00000418628 APC2O95996 2303 aa18.29■□□□□ 0.52
PTCD3-204ENST00000418628 WDFY3Q8IZQ1 3526 aa18.29■□□□□ 0.52
PTCD3-204ENST00000418628 ASPMQ8IZT6 3477 aa18.29■□□□□ 0.52
PTCD3-204ENST00000418628 GOLGA8KD6RF30 607 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 GOLGA8TH3BQL2 631 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 PRMT5O14744 637 aaPredicted RBP18.28■□□□□ 0.52
PTCD3-204ENST00000418628 SNX2O60749 519 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 TTC4O95801 387 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 RPL10P27635 214 aaKnown RBP18.28■□□□□ 0.52
PTCD3-204ENST00000418628 PBLDP30039 288 aaPredicted RBP18.28■□□□□ 0.52
PTCD3-204ENST00000418628 SLC19A1P41440 591 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 DRG2P55039 364 aaKnown RBP18.28■□□□□ 0.52
PTCD3-204ENST00000418628 ADARP55265 1226 aaKnown RBP18.28■□□□□ 0.52
PTCD3-204ENST00000418628 HHEXQ03014 270 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 CLCA4Q14CN2 919 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 CCNI2Q6ZMN8 369 aaPredicted RBP18.28■□□□□ 0.52
PTCD3-204ENST00000418628 CENPUQ71F23 418 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 CILP2Q8IUL8 1156 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 CCNJLQ8IV13 435 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 NOA1Q8NC60 698 aaKnown RBP18.28■□□□□ 0.52
PTCD3-204ENST00000418628 RMDN2Q96LZ7 410 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 TCF12Q99081 682 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 TTC1Q99614 292 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 CCM2Q9BSQ5 444 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 PHACTR1Q9C0D0 580 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 RAB17Q9H0T7 212 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 OR52A5Q9H2C5 316 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 DPH5Q9H2P9 285 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 VPS37BQ9H9H4 285 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 POT1Q9NUX5 634 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 IL1RAPL1Q9NZN1 696 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 CPNE7Q9UBL6 633 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 ACSL5Q9ULC5 683 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 MAD1L1Q9Y6D9 718 aa18.28■□□□□ 0.52
PTCD3-204ENST00000418628 LILRA5A6NI73 299 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 D6RAR5 112 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 B4GAT1O43505 415 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 POLBP06746 335 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 PPARGP37231 505 aaPredicted RBP18.27■□□□□ 0.52
PTCD3-204ENST00000418628 ARL4CP56559 192 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 SQSTM1Q13501 440 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 CAMK2BQ13554 666 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 FRG1Q14331 258 aaKnown RBP18.27■□□□□ 0.52
PTCD3-204ENST00000418628 SEPT7Q16181 437 aaKnown RBP18.27■□□□□ 0.52
PTCD3-204ENST00000418628 LONRF1Q17RB8 773 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 BBS9Q3SYG4 887 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 RNF187Q5TA31 235 aaPredicted RBP18.27■□□□□ 0.52
PTCD3-204ENST00000418628 CAPRIN2Q6IMN6 1127 aaKnown RBP18.27■□□□□ 0.52
PTCD3-204ENST00000418628 MRNIPQ6NTE8 343 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 NEPROQ6NW34 567 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 C8orf74Q6P047 294 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 ZDHHC24Q6UX98 284 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 SLC9B2Q86UD5 537 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 LRRC6Q86X45 466 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 LMNTD2Q8IXW0 634 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.27■□□□□ 0.52
PTCD3-204ENST00000418628 LKAAEAR1Q8TD35 194 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 ART4Q93070 314 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 BIRC8Q96P09 236 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 LRRN3Q9H3W5 708 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 EPB41L5Q9HCM4 733 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 ANGPTL2Q9UKU9 493 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 MSRB2Q9Y3D2 182 aa18.27■□□□□ 0.52
PTCD3-204ENST00000418628 HEATR5BQ9P2D3 2071 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 OR52A4PA6NMU1 304 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 PDZK1P1A8MUH7 402 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 MT-CO3P00414 261 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 FTH1P02794 183 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 RPLP0P05388 317 aaKnown RBP18.26■□□□□ 0.51
PTCD3-204ENST00000418628 OR56A5P0C7T3 313 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 SPINK2P20155 84 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 ELK3P41970 407 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 EPHA4P54764 986 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 CCL7P80098 99 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 CALCOCO2Q13137 446 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 RPA4Q13156 261 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 FASTKD3Q14CZ7 662 aaKnown RBP18.26■□□□□ 0.51
PTCD3-204ENST00000418628 TRADDQ15628 312 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 CLPPQ16740 277 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-204ENST00000418628 SPANXN3Q5MJ09 141 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 CTSL3PQ5NE16 218 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 UNC5AQ6ZN44 842 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 CNTN4Q8IWV2 1026 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 UNC5BQ8IZJ1 945 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 MNS1Q8NEH6 495 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 LRRC1Q9BTT6 524 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 CARD6Q9BX69 1037 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 SLC40A1Q9NP59 571 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 INTS10Q9NVR2 710 aaKnown RBP18.26■□□□□ 0.51
PTCD3-204ENST00000418628 CLCA2Q9UQC9 943 aa18.26■□□□□ 0.51
PTCD3-204ENST00000418628 UTP11Q9Y3A2 253 aaKnown RBP18.26■□□□□ 0.51
PTCD3-204ENST00000418628 IGHV1OR21-1A0A087WYE8 117 aa18.25■□□□□ 0.51
PTCD3-204ENST00000418628 SLC5A10A0PJK1 596 aa18.25■□□□□ 0.51
PTCD3-204ENST00000418628 CTAGE15A4D2H0 777 aa18.25■□□□□ 0.51
PTCD3-204ENST00000418628 RHPN2P1A8MT19 583 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms