RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 GALTP07902 379 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 PSMD4P55036 377 aaKnown RBP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 C11orf65Q8NCR3 313 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 CLHC1Q8NHS4 586 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 PSMD13Q9UNM6 376 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 UBXN7O94888 489 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 ACTR1BP42025 376 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 NRIP1P48552 1158 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 AP1S2P56377 157 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 ACTR1AP61163 376 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 CMTR2Q8IYT2 770 aaKnown RBP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 FSTL5Q8N475 847 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 XAGE5Q8WWM1 108 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 NPY6RQ99463 290 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 EFCAB11Q9BUY7 163 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 C1orf109Q9NX04 203 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 FAM86C2PA6NEL3 165 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 TIE1P35590 1138 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 GDF10P55107 478 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 SRSF11Q05519 484 aaKnown RBP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 SERINC3Q13530 473 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 NAIF1Q69YI7 327 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 NRSN1Q8IZ57 195 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 NMD3Q96D46 503 aaKnown RBP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 COQ6Q9Y2Z9 468 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 K7EPI3 171 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 HNRNPA1P09651 372 aaKnown RBP eCLIP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 SLC10A7Q0GE19 358 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 MYLK3Q32MK0 819 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 MINDY4Q4G0A6 757 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 DENND6AQ8IWF6 608 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 DCAKDQ8WVC6 231 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 HMGB4Q8WW32 186 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 GATA5Q9BWX5 397 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 C6orf62Q9GZU0 229 aaPredicted RBP17.06■□□□□ 0.32
PHRF1-202ENST00000413872 MAFFQ9ULX9 164 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 TOPAZ1Q8N9V7 1692 aa17.06■□□□□ 0.32
PHRF1-202ENST00000413872 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 ZNF487B1APH4 448 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 METTL18O95568 372 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 CAPN1P07384 714 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 RTL4Q6ZR62 310 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 EXOSC8Q96B26 276 aaKnown RBP17.05■□□□□ 0.32
PHRF1-202ENST00000413872 AJAP1Q9UKB5 411 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-202ENST00000413872 B3GALT2O43825 422 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 KCNQ1P51787 676 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 NATD1Q8N6N6 113 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 PCYT2Q99447 389 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 MRPS30Q9NP92 439 aaKnown RBP17.05■□□□□ 0.32
PHRF1-202ENST00000413872 CACNG4Q9UBN1 327 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 SIX4Q9UIU6 781 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 KDELR3O43731 214 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 ANPEPP15144 967 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 IL1R2P27930 398 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 GK5Q6ZS86 529 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 LRRTM4Q86VH4 590 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 MMAAQ8IVH4 418 aaKnown RBP17.05■□□□□ 0.32
PHRF1-202ENST00000413872 BPIFB6Q8NFQ5 453 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 NPAS2Q99743 824 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 PRRG4Q9BZD6 226 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 GRIP2Q9C0E4 1043 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 CDC14AQ9UNH5 594 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 IQCF5A8MTL0 148 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 OR4F21O95013 312 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 BEND5Q7L4P6 421 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 CDKN2AIPNLQ96HQ2 116 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 CNPPD1Q9BV87 410 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 BTBD1Q9H0C5 482 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 TMEM248Q9NWD8 314 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 EIF2B4Q9UI10 523 aaKnown RBP17.05■□□□□ 0.32
PHRF1-202ENST00000413872 ARL5AQ9Y689 179 aa17.05■□□□□ 0.32
PHRF1-202ENST00000413872 ELOVL7A1L3X0 281 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 IL6P05231 212 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 CHN2P52757 468 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 RSBN1Q5VWQ0 802 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 ZNF783Q6ZMS7 281 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 FAM192AQ9GZU8 254 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 CARS2Q9HA77 564 aaKnown RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 EQTNQ9NQ60 294 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 GRHL1Q9NZI5 618 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 COPS7AQ9UBW8 275 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 LINC00854A0A1B0GVQ3 168 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 CBSLP0DN79 551 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 TFPIP10646 304 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 CBSP35520 551 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 GALNT2Q10471 571 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 TEAD2Q15562 447 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 MS4A13Q5J8X5 152 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 TRAF7Q6Q0C0 670 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 TPRG1Q6ZUI0 275 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 GRASPQ7Z6J2 395 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-202ENST00000413872 NUAK2Q9H093 628 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 HSD3B7Q9H2F3 369 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 USP29Q9HBJ7 922 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 MATN4O95460 622 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 CHRNA1P02708 482 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 NR2F6P10588 404 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 CHRNA4P43681 627 aa17.04■□□□□ 0.32
PHRF1-202ENST00000413872 PRKD1Q15139 912 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms