RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FAM198BQ6UWH4 519 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 HPS6Q86YV9 775 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 GLIS1Q8NBF1 620 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 FDCSPQ8NFU4 85 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 PPM1MQ96MI6 270 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 NUDT9Q9BW91 350 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 PACSIN1Q9BY11 444 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 SMOXQ9NWM0 555 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 IL17CQ9P0M4 197 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 PSMD13Q9UNM6 376 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 HEY1Q9Y5J3 304 aa11.87□□□□□ -0.51
LIMS2-210ENST00000413578 PRRC2CQ9Y520 2896 aaKnown RBP11.86□□□□□ -0.51
LIMS2-210ENST00000413578 A1L4Q6 167 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 MEN1O00255 615 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 UGT1A9O60656 530 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 DPM1O60762 260 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 CLDN1O95832 211 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 UGT1A6P19224 532 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 UGT1A1P22309 533 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 UGT1A4P22310 534 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 PTPN3P26045 913 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 SPAM1P38567 509 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 KPNA2P52292 529 aaKnown RBP11.86□□□□□ -0.51
LIMS2-210ENST00000413578 ITGA1P56199 1179 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 GSDMDP57764 484 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 PDE1BQ01064 536 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 ABRQ12979 859 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 PDK1Q15118 436 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 NOMO1Q15155 1222 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 EIF2S3LQ2VIR3 472 aaKnown RBP11.86□□□□□ -0.51
LIMS2-210ENST00000413578 LDLRAP1Q5SW96 308 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 ZDHHC20Q5W0Z9 365 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 METRNLQ641Q3 311 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 TMEM220Q6QAJ8 160 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 NPNTQ6UXI9 565 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 TMEM126BQ8IUX1 230 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 DSELQ8IZU8 1212 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 ENDOVQ8N8Q3 282 aaKnown RBP11.86□□□□□ -0.51
LIMS2-210ENST00000413578 ZFPM2Q8WW38 1151 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 MR1Q95460 341 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 PNPLA2Q96AD5 504 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 TCTN2Q96GX1 697 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 TEKT5Q96M29 485 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 INSM2Q96T92 566 aaPredicted RBP11.86□□□□□ -0.51
LIMS2-210ENST00000413578 SMAD5Q99717 465 aaKnown RBP11.86□□□□□ -0.51
LIMS2-210ENST00000413578 NLNQ9BYT8 704 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 TRABDQ9H4I3 376 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 UGT1A7Q9HAW7 530 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 UGT1A10Q9HAW8 530 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 UGT1A8Q9HAW9 530 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 IMP3Q9NV31 184 aaKnown RBP11.86□□□□□ -0.51
LIMS2-210ENST00000413578 HRASLS2Q9NWW9 162 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 CTTNBP2NLQ9P2B4 639 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 SLC24A2Q9UI40 661 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 LCMT1Q9UIC8 334 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 TCFL5Q9UL49 500 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 CAPN11Q9UMQ6 739 aa11.86□□□□□ -0.51
LIMS2-210ENST00000413578 TNRC6AQ8NDV7 1962 aaKnown RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 A0A0A6YYK5 440 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 UBA6A0AVT1 1052 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 LRRD1A4D1F6 860 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 APOL1O14791 398 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 PPP1R12AO14974 1030 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 PMPCBO75439 489 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 TMEM63AO94886 807 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 LDLRP01130 860 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 EPOP01588 193 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 H2AFZP0C0S5 128 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 MSL3P1P0C860 447 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 HNRNPH3P31942 346 aaKnown RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 WASHC5Q12768 1159 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 PLCL1Q15111 1095 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 PRKD1Q15139 912 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 GPRC6AQ5T6X5 926 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 FAM69BQ5VUD6 431 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 DUS1LQ6P1R4 473 aaKnown RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 H2AFVQ71UI9 128 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 MAMDC2Q7Z304 686 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 OOSP2Q86WS3 158 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 ZBTB2Q8N680 514 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 TMEM102Q8N9M5 508 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 GDAP1Q8TB36 358 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 TTC25Q96NG3 672 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 ZCCHC2Q9C0B9 1178 aaKnown RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 KIR3DX1Q9H7L2 352 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 PCMTD2Q9NV79 361 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 UBP1Q9NZI7 540 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 ERRFI1Q9UJM3 462 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 POMT2Q9UKY4 750 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 SNX7Q9UNH6 387 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 CFAP20Q9Y6A4 193 aaKnown RBP11.85□□□□□ -0.51
LIMS2-210ENST00000413578 PCSK5Q92824 1860 aa11.85□□□□□ -0.51
LIMS2-210ENST00000413578 GLYATL1P3A0A0U1RQE8 302 aa11.84□□□□□ -0.51
LIMS2-210ENST00000413578 OR6C74A6NCV1 312 aa11.84□□□□□ -0.51
LIMS2-210ENST00000413578 MGAT4DA6NG13 374 aa11.84□□□□□ -0.51
LIMS2-210ENST00000413578 OR2AG2A6NM03 316 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms