RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MAD2L1Q13257 205 aaPredicted RBP13.38□□□□□ -0.27
LIMS1-205ENST00000410093 CEACAM7Q14002 265 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 CHRNA6Q15825 494 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 ZNF77Q15935 545 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 FUT11Q495W5 492 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 GDPD4Q6W3E5 623 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 RPS27LQ71UM5 84 aaKnown RBP13.38□□□□□ -0.27
LIMS1-205ENST00000410093 ARPINQ7Z6K5 226 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 ADCY4Q8NFM4 1077 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 PYDC1Q8WXC3 89 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 FAM136AQ96C01 138 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 MARK4Q96L34 752 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 C3orf30Q96M34 536 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 SLC30A3Q99726 388 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 TRIM54Q9BYV2 358 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 NSUN3Q9H649 340 aaKnown RBP13.38□□□□□ -0.27
LIMS1-205ENST00000410093 SARS2Q9NP81 518 aaKnown RBP13.38□□□□□ -0.27
LIMS1-205ENST00000410093 AIG1Q9NVV5 245 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 ADA2Q9NZK5 511 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 GALPQ9UBC7 116 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 GPR45Q9Y5Y3 372 aa13.38□□□□□ -0.27
LIMS1-205ENST00000410093 BPTFQ12830 3046 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 MAGEA13PA6NCF6 341 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 CFAP99D6REC4 459 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 FBP2O00757 339 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 KATNA1O75449 491 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 AP2A2O94973 939 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 PRAMEF12O95522 483 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 C8GP07360 202 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 RHOP08100 348 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 ALDOCP09972 364 aaKnown RBP13.37□□□□□ -0.27
LIMS1-205ENST00000410093 POLR2EP19388 210 aaKnown RBP13.37□□□□□ -0.27
LIMS1-205ENST00000410093 HSPA13P48723 471 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 HK3P52790 923 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 KCNK10P57789 538 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 ERVFC1P60507 584 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 TFF2Q03403 129 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 BNIP2Q12982 314 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 SP140Q13342 867 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 ARHGEF7Q14155 803 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 ATP6AP1LQ52LC2 224 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 BLOC1S3Q6QNY0 202 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 NEK10Q6ZWH5 1172 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 SYVN1Q86TM6 617 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 PDSS2Q86YH6 399 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 HMGCLL1Q8TB92 370 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 SPPL3Q8TCT6 385 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 BHMTQ93088 406 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 ZUFSPQ96AP4 578 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 LRGUKQ96M69 825 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 NSUN5Q96P11 429 aaKnown RBP13.37□□□□□ -0.27
LIMS1-205ENST00000410093 SMIM14Q96QK8 99 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 TUBB1Q9H4B7 451 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 Q9H521 79 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 PLK2Q9NYY3 685 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 ABCD2Q9UBJ2 740 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 DKK3Q9UBP4 350 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 CD300AQ9UGN4 299 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 SUN2Q9UH99 717 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 IKZF3Q9UKT9 509 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 CNOT11Q9UKZ1 510 aaKnown RBP13.37□□□□□ -0.27
LIMS1-205ENST00000410093 CLEC4EQ9ULY5 219 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 PLXNB3Q9ULL4 1909 aa13.37□□□□□ -0.27
LIMS1-205ENST00000410093 A0A1W2PP18 115 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 NPIPB15A6NHN6 443 aaPredicted RBP13.36□□□□□ -0.27
LIMS1-205ENST00000410093 H0YJX3 145 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 H3BNX3 289 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 DNAJA2O60884 412 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 CSPG5O95196 566 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 CAPNS1P04632 268 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 C8BP07358 591 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 MPC1LP0DKB6 136 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
LIMS1-205ENST00000410093 HSD17B1P14061 328 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 TYRP14679 529 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 XRCC1P18887 633 aaPredicted RBP13.36□□□□□ -0.27
LIMS1-205ENST00000410093 TSPAN8P19075 237 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 SPINT3P49223 89 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 HNMTP50135 292 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 EMX2Q04743 252 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 GTF2H2Q13888 395 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 RCAN2Q14206 197 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 TEAD2Q15562 447 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 PLEKHS1Q5SXH7 462 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 OGFRL1Q5TC84 451 aaPredicted RBP13.36□□□□□ -0.27
LIMS1-205ENST00000410093 LRRC66Q68CR7 880 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 TRIM68Q6AZZ1 485 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 GTF2H2CQ6P1K8 395 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 IZUMO2Q6UXV1 221 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 TMEM25Q86YD3 366 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 FUNDC1Q8IVP5 155 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 FAM9CQ8IZT9 166 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 OR6K2Q8NGY2 324 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 SLC22A17Q8WUG5 538 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 POF1BQ8WVV4 589 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 PBXIP1Q96AQ6 731 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 PPP3R2Q96LZ3 170 aa13.36□□□□□ -0.27
LIMS1-205ENST00000410093 HEPHQ9BQS7 1158 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms