RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 REM1O75628 298 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 PRH1P02810 166 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MPP1Q00013 466 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 CDK18Q07002 472 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 L1RE1Q9UN81 338 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 ACTL7BQ9Y614 415 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MMP20O60882 483 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MAFO75444 373 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 DGUOKQ16854 277 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SSX6Q7RTT6 188 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 ALYREFQ86V81 257 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 CLPTM1LQ96KA5 538 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 CDK15Q96Q40 435 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SSR3Q9UNL2 185 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 HEMK1Q9Y5R4 338 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MEGF6O75095 1541 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 RECQL5O94762 991 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MTHFRP42898 656 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MSLNQ13421 630 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TUSC3Q13454 348 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 C1orf61Q13536 156 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 GANABQ14697 944 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 KPNB1Q14974 876 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 C12orf76Q8N812 135 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TLX3O43711 291 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 LYPLA1O75608 230 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SHBGP04278 402 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 ALPIP09923 528 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 IL18R1Q13478 541 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SETD9Q8NE22 299 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 OR4C6Q8NH72 309 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 GPR21Q99679 349 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 NUSAP1Q9BXS6 441 aaKnown RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 IL21RQ9HBE5 538 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 GIN1Q9NXP7 522 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TRAFD1O14545 582 aaPredicted RBP8.32□□□□□ -1.08
SCN9A-203ENST00000409672 NR4A1P22736 598 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 MPSTP25325 297 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 LMO2P25791 158 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SWI5Q1ZZU3 235 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 PYHIN1Q6K0P9 492 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 SERPINA9Q86WD7 417 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TMC8Q8IU68 726 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 PPP3R2Q96LZ3 170 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 C9orf16Q9BUW7 83 aa8.32□□□□□ -1.08
SCN9A-203ENST00000409672 TNFAIP8O95379 198 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 MYCLP1P12525 358 aaPredicted RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PXNP49023 591 aaPredicted RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 GK5Q6ZS86 529 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF227Q86WZ6 799 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 OR5AK3PQ8NH89 298 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 C1orf216Q8TAB5 229 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PSMG2Q969U7 264 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PYCR2Q96C36 320 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PPP1R14BQ96C90 147 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 BTN2A3PQ96KV6 586 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 SAMD4AQ9UPU9 718 aaKnown RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 IRAK3Q9Y616 596 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ZC3H13Q5T200 1668 aaKnown RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 CHN2P52757 468 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 TNFAIP8L2Q6P589 184 aaPredicted RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 AMZ2Q86W34 360 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ECHDC2Q86YB7 292 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 POF1BQ8WVV4 589 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 TTYH2Q9BSA4 534 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 STRA6Q9BX79 667 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 STRADBQ9C0K7 418 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ENOPH1Q9UHY7 261 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 MGAT4AQ9UM21 535 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 E9PCH4 1651 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 A0A1W2PQ72 361 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 SLC35F4A4IF30 521 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PLATP00750 562 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 GZMAP12544 262 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 CTSKP43235 329 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 RAB2AP61019 212 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 IKBIPQ70UQ0 350 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 SGIP1Q9BQI5 828 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 TBC1D17Q9HA65 648 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 hCG_1807616A0A1W2PRN6 198 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 OR1I1O60431 355 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PRLRP16471 622 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ADRA1DP25100 572 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 ZNF143P52747 638 aaPredicted RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 MTX3Q5HYI7 312 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 SPRYD7Q5W111 196 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 IFNL1Q8IU54 200 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 AZIN2Q96A70 460 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 MALT1Q9UDY8 824 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 PCDHA2Q9Y5H9 948 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 BCORL1Q5H9F3 1711 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 OR6C75A6NL08 312 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 hCG_2039718K7EN88 272 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 RPP38P78345 283 aaKnown RBP8.31□□□□□ -1.08
SCN9A-203ENST00000409672 FOXK1P85037 733 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 MED27Q6P2C8 311 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 FAM131AQ6UXB0 335 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 CNPY4Q8N129 248 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 COX4I2Q96KJ9 171 aa8.31□□□□□ -1.08
SCN9A-203ENST00000409672 TMEM134Q9H6X4 195 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms