RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 BMPR2Q13873 1038 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 LRP8Q14114 963 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 MROH9Q5TGP6 573 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 FAM45BPQ6NSW5 357 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 ADGRD1Q6QNK2 874 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 DCLK2Q8N568 766 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 LILRA3Q8N6C8 439 aaPredicted RBP32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 FAM45AQ8TCE6 357 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 LMX1AQ8TE12 382 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 GPR22Q99680 433 aa32.7■■■□□ 2.83
CSNK1E-204ENST00000403904 A0A1B0GTQ1 180 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 HMX2A2RU54 273 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 SMIM23A6NLE4 172 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 PIAS2O75928 621 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 CER1O95813 267 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 ILF3Q12906 894 aaKnown RBP eCLIP32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 NFE2L1Q14494 772 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 NRROSQ86YC3 692 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 CFAP206Q8IYR0 622 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 IQCKQ8N0W5 287 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 ZNF548Q8NEK5 533 aaPredicted RBP32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 GPBAR1Q8TDU6 330 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 OLFM1Q99784 485 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 SPATS2LQ9NUQ6 558 aaKnown RBP32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 SPASTQ9UBP0 616 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 SLC39A10Q9ULF5 831 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 NFS1Q9Y697 457 aa32.7■■■□□ 2.82
CSNK1E-204ENST00000403904 C17orf113A0A1B0GUU1 675 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 ATXN3P54252 364 aaPredicted RBP32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 BOP1Q14137 746 aaKnown RBP32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 ZNF658BQ4V348 819 aaPredicted RBP32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 SLC30A9Q6PML9 568 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 FAM83HQ6ZRV2 1179 aaPredicted RBP32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 PIM3Q86V86 326 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 GPR21Q99679 349 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 SLC30A3Q99726 388 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 OSGEPL1Q9H4B0 414 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 CAB39LQ9H9S4 337 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 PARD6AQ9NPB6 346 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 UCKL1Q9NWZ5 548 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 TAS2R13Q9NYV9 303 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 CTNNAL1Q9UBT7 734 aa32.69■■■□□ 2.82
CSNK1E-204ENST00000403904 DFNA5O60443 496 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 VPS26AO75436 327 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 VCLP18206 1134 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 AOAHP28039 575 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 SERPINB9P50453 376 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 CLCN7P51798 805 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 ILF2Q12905 390 aaKnown RBP32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 XKR5Q6UX68 686 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 OTOAQ7RTW8 1153 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 MINDY1Q8N5J2 469 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 SIDT2Q8NBJ9 832 aaKnown RBP32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 HM13Q8TCT9 377 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 PSMC3IPQ9P2W1 217 aaPredicted RBP32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 TBK1Q9UHD2 729 aa32.68■■■□□ 2.82
CSNK1E-204ENST00000403904 AQP9O43315 295 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 LRP3O75074 770 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 TCEA3O75764 348 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 GSTM1P09488 218 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 FDXRP22570 491 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 DGKAP23743 735 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 ACTR1BP42025 376 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 TAS2R39P59534 338 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 ACTR1AP61163 376 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 GSTM4Q03013 218 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 USP10Q14694 798 aaKnown RBP32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 CASP8Q14790 479 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 ELOCQ15369 112 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 CSRP2Q16527 193 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 TAF8Q7Z7C8 310 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 ZIM3Q96PE6 472 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 GSDMCQ9BYG8 508 aa32.67■■■□□ 2.82
CSNK1E-204ENST00000403904 TLDC2A0PJX2 215 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 KRT38O76015 456 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 EPHA8P29322 1005 aaPredicted RBP32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 DMPKQ09013 629 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 FSTL5Q8N475 847 aaPredicted RBP32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 GIMAP7Q8NHV1 300 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 ZBTB9Q96C00 473 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 COG4Q9H9E3 785 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 PPCSQ9HAB8 311 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 ZFHX2Q9C0A1 2572 aaPredicted RBP32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 KLHL33A6NCF5 533 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 KCNJ13O60928 360 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 POU4F1Q01851 419 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 HSPA14Q0VDF9 509 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 TAOK1Q7L7X3 1001 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 CEP97Q8IW35 865 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 CD200R1Q8TD46 325 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 LATS2Q9NRM7 1088 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 DHRS7Q9Y394 339 aa32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 ARHGEF17Q96PE2 2063 aaPredicted RBP32.66■■■□□ 2.82
CSNK1E-204ENST00000403904 EP300Q09472 2414 aaPredicted RBP32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 PRR19A6NJB7 356 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 RASGRF2O14827 1237 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 TGM1P22735 817 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 PREPP48147 710 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 CCT8P50990 548 aa32.65■■■□□ 2.82
CSNK1E-204ENST00000403904 SLC12A2P55011 1212 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms