RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZBTB49Q6ZSB9 765 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 CHST3Q7LGC8 479 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 RNF113BQ8IZP6 322 aaKnown RBP3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 KIF18AQ8NI77 898 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 SPDL1Q96EA4 605 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF479Q96JC4 524 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 SLC22A12Q96S37 553 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 NUP85Q9BW27 656 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 SEZ6LQ9BYH1 1024 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 GRPEL1Q9HAV7 217 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 PCDH9Q9HC56 1237 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 TRPC7Q9HCX4 862 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 EQTNQ9NQ60 294 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 MIOSQ9NXC5 875 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 SLC24A2Q9UI40 661 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 OSGIN1Q9UJX0 560 aa3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 RALYQ9UKM9 306 aaKnown RBP3.76□□□□□ -1.81
HMGB1P17-201ENST00000403495 IGLV5-37A0A075B6J1 123 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GOLGA6L9A6NEM1 432 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ANKUB1A6NFN9 424 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 C5orf60A6NFR6 353 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 HNRNPCL2B2RXH8 293 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 EIF3DO15371 548 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 WDR1O75083 606 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GAGE7O76087 117 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 CAMTA2O94983 1202 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZBTB11O95625 1053 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ALPLP05186 524 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GAGE12FP0CL80 117 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GAGE12GP0CL81 117 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GAGE12IP0CL82 117 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ACP2P11117 423 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 FDPSP14324 419 aaKnown RBP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 PTAFRP25105 342 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 TLX1P31314 330 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GNL1P36915 607 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 CDKN2AP42771 156 aaKnown RBP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 CTSCP53634 463 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 CDK3Q00526 305 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 MZT1Q08AG7 82 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GAGE1Q13065 139 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GAGE4Q13068 117 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 VWC2Q2TAL6 325 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 TMEM35AQ53FP2 167 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 RAB6CQ53S08 254 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 CST9LP1Q5W188 147 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 KRT39Q6A163 491 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ASB18Q6ZVZ8 466 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ANKRD23Q86SG2 305 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 THNSL1Q8IYQ7 743 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 CEP57L1Q8IYX8 460 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 NKAIN3Q8N8D7 197 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 CAMKVQ8NCB2 501 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 TSPAN14Q8NG11 270 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 OR5M8Q8NGP6 311 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 LILRB1Q8NHL6 650 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 THAP6Q8TBB0 222 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 PPP4R1Q8TF05 950 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 DNAAF4Q8WXU2 420 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 VOPP1Q96AW1 172 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 PHF21AQ96BD5 680 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 HDAC11Q96DB2 347 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ADGRG7Q96K78 797 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 MS4A10Q96PG2 267 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 RAB6CQ9H0N0 254 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 GAREM1Q9H706 876 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 NOL11Q9H8H0 719 aaKnown RBP3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ANKZF1Q9H8Y5 726 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 HHATLQ9HCP6 504 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 TMEM30AQ9NV96 361 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 SMARCAL1Q9NZC9 954 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 PTTG2Q9NZH5 202 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 TUBE1Q9UJT0 475 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZNF112Q9UJU3 913 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 CKAP5Q14008 2032 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 EVPLQ92817 2033 aa3.75□□□□□ -1.81
HMGB1P17-201ENST00000403495 ASTN2O75129 1339 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 CACNA1IQ9P0X4 2223 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 CLEC18AA5D8T8 446 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 MYMKA6NI61 221 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 SYNCRIPO60506 623 aaKnown RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 TBCAO75347 108 aaKnown RBP3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 BMP15O95972 392 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 QDPRP09417 244 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 LINGO3P0C6S8 592 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 FCGR1AP12314 374 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 ERCC2P18074 760 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 ACHEP22303 614 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 PTPN3P26045 913 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 PEX5P50542 639 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 RAB28P51157 221 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 TUBA1BP68363 451 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 PLIN5Q00G26 463 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 ACSM1Q08AH1 577 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 ZBTB17Q13105 803 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 HYAL4Q2M3T9 481 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 HECTD3Q5T447 861 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 GCNT6Q5T4J0 391 aa3.74□□□□□ -1.81
HMGB1P17-201ENST00000403495 FAM171BQ6P995 826 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms