RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 MAPK15Q8TD08 544 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 MAGEC3Q8TD91 643 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ZNF778Q96MU6 729 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 TMEM109Q9BVC6 243 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 RXFP3Q9NSD7 469 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 CA5BQ9Y2D0 317 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 DHRS7Q9Y394 339 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 UQCRHLA0A096LP55 91 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 C4orf47A7E2U8 309 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 AVILO75366 819 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 RFPL3O75679 317 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 MATN4O95460 622 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 APOA4P06727 396 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 UQCRHP07919 91 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 GP5P40197 560 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 SLC1A2P43004 574 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 PLTPP55058 493 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ZKSCAN8Q15776 578 aaPredicted RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 BBS9Q3SYG4 887 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 CTSL3PQ5NE16 218 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 TMEM220Q6QAJ8 160 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 TAOK1Q7L7X3 1001 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 KMT5CQ86Y97 462 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 TBC1D21Q8IYX1 336 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ZDHHC1Q8WTX9 485 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 INPP5DQ92835 1189 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 MTBPQ96DY7 904 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 CYTH2Q99418 400 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 GPR22Q99680 433 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 C20orf96Q9NUD7 363 aaPredicted RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 ANKMY1Q9P2S6 941 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 GULP1Q9UBP9 304 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 DKK4Q9UBT3 224 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 SLC24A2Q9UI40 661 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 TMCO1Q9UM00 188 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 CDYLQ9Y232 598 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 COLEC10Q9Y6Z7 277 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 CACNA1HO95180 2353 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 MUC3AQ02505 3323 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 A0A087WUV0 522 aaPredicted RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 ZNF839A8K0R7 811 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 A8MX80 341 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 POP7O75817 140 aaKnown RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 NUDT17P0C025 328 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 MTHFD1P11586 935 aaKnown RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 KCNA4P22459 653 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 AKT1P31749 480 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 CCKBRP32239 447 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 CLCN7P51798 805 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 GPX6P59796 221 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 EIF3IQ13347 325 aaKnown RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 LPAL2Q16609 132 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 KYNUQ16719 465 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 PRRT3Q5FWE3 981 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 DENND2CQ68D51 928 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ZNF470Q6ECI4 717 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 TIFABQ6ZNK6 161 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 RAB44Q7Z6P3 723 aaPredicted RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 TMPRSS12Q86WS5 348 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 IGDCC3Q8IVU1 814 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ZBED8Q8IZ13 594 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP16-204ENST00000399976 OR6P1Q8NGX9 317 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 LMX1AQ8TE12 382 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ERLEC1Q96DZ1 483 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 CNDP2Q96KP4 475 aaKnown RBP7.38□□□□□ -1.23
USP16-204ENST00000399976 APOLD1Q96LR9 279 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 RBBP8Q99708 897 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 TMEM168Q9H0V1 697 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 DPH5Q9H2P9 285 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ANKZF1Q9H8Y5 726 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 SYTL2Q9HCH5 934 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 LRRC4CQ9HCJ2 640 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 SAYSD1Q9NPB0 183 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 ENTPD2Q9Y5L3 495 aa7.38□□□□□ -1.23
USP16-204ENST00000399976 TCRBV9S1A1TA0A576 114 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 F5H423 210 aaPredicted RBP7.37□□□□□ -1.23
USP16-204ENST00000399976 UGT1A9O60656 530 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 C9P02748 559 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 COL6A2P12110 1019 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 UGT1A6P19224 532 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 UGT1A1P22309 533 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 UGT1A4P22310 534 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 PMLP29590 882 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 UGT1A3P35503 534 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 UGT1A5P35504 534 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 CTSCP53634 463 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 LIMK2P53671 638 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 FOXK2Q01167 660 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 MAP9Q49MG5 647 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 TCEAL6Q6IPX3 200 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 CASC4Q6P4E1 433 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 KLHL35Q6PF15 583 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 CCNI2Q6ZMN8 369 aaPredicted RBP7.37□□□□□ -1.23
USP16-204ENST00000399976 ZC3HC1Q86WB0 502 aaKnown RBP7.37□□□□□ -1.23
USP16-204ENST00000399976 PALM2Q8IXS6 379 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 NAGSQ8N159 534 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 GALNT15Q8N3T1 639 aa7.37□□□□□ -1.23
USP16-204ENST00000399976 AENQ8WTP8 325 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms