RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 GSDMBQ8TAX9 411 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 TRIM56Q9BRZ2 755 aaKnown RBP17.35■□□□□ 0.37
CTNS-203ENST00000399306 UCK1Q9HA47 277 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 SAYSD1Q9NPB0 183 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 TOR4AQ9NXH8 423 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 MOCS1Q9NZB8 636 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 KNTC1P50748 2209 aa17.35■□□□□ 0.37
CTNS-203ENST00000399306 ESYT3A0FGR9 886 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 B4DGG1 531 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 KPNA5O15131 536 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 OR1I1O60431 355 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 RFPL3O75679 317 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 S1PR4O95977 384 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 XRCC1P18887 633 aaPredicted RBP17.34■□□□□ 0.37
CTNS-203ENST00000399306 GPR3P46089 330 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 LEPRP48357 1165 aaKnown RBP17.34■□□□□ 0.37
CTNS-203ENST00000399306 TRADDQ15628 312 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 PPM1JQ5JR12 505 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 ZNF470Q6ECI4 717 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 SLC9B2Q86UD5 537 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 CACTIN-AS1Q8N1I8 211 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 OTUD6BQ8N6M0 293 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 C2CD4AQ8NCU7 369 aaPredicted RBP17.34■□□□□ 0.37
CTNS-203ENST00000399306 MAPK15Q8TD08 544 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 ZFPM2Q8WW38 1151 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 SH3KBP1Q96B97 665 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 CCDC97Q96F63 343 aaPredicted RBP17.34■□□□□ 0.37
CTNS-203ENST00000399306 OSGEPL1Q9H4B0 414 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 STN1Q9H668 368 aaKnown RBP17.34■□□□□ 0.37
CTNS-203ENST00000399306 SARS2Q9NP81 518 aaKnown RBP17.34■□□□□ 0.37
CTNS-203ENST00000399306 LATS2Q9NRM7 1088 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 NSMCE4AQ9NXX6 385 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 KLHL42Q9P2K6 505 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 FBXO5Q9UKT4 447 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 CORO1CQ9ULV4 474 aaPredicted RBP17.34■□□□□ 0.37
CTNS-203ENST00000399306 PRSS21Q9Y6M0 314 aa17.34■□□□□ 0.37
CTNS-203ENST00000399306 FTH1P19P0C7X4 201 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 HALP42357 657 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 CD151P48509 253 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 MGAT5Q09328 741 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 FASTKD3Q14CZ7 662 aaKnown RBP17.33■□□□□ 0.36
CTNS-203ENST00000399306 CLPPQ16740 277 aaPredicted RBP17.33■□□□□ 0.36
CTNS-203ENST00000399306 PLA2G4EQ3MJ16 856 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 HSP90AA5PQ58FG0 334 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.33■□□□□ 0.36
CTNS-203ENST00000399306 DGLUCYQ7Z3D6 616 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 ANKMY2Q8IV38 441 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 PALM2Q8IXS6 379 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 ARL14Q8N4G2 192 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 ADAMTS14Q8WXS8 1223 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 BIRC8Q96P09 236 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 POT1Q9NUX5 634 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 DNAJC16Q9Y2G8 782 aa17.33■□□□□ 0.36
CTNS-203ENST00000399306 SPAARA0A1B0GVQ0 90 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 GOLGA8KD6RF30 607 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 GOLGA8TH3BQL2 631 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 GIPC1O14908 333 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 BRAFP15056 766 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 SLC1A2P43004 574 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 MAGEA4P43358 317 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 UBE2IP63279 158 aaKnown RBP17.32■□□□□ 0.36
CTNS-203ENST00000399306 NFE2L1Q14494 772 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 TCEA2Q15560 299 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 TEDDM1Q5T9Z0 273 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 PTRHD1Q6GMV3 140 aaKnown RBP17.32■□□□□ 0.36
CTNS-203ENST00000399306 XKR5Q6UX68 686 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 MICALCLQ6ZW33 695 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 ERMP1Q7Z2K6 904 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 LDB1Q86U70 411 aaPredicted RBP17.32■□□□□ 0.36
CTNS-203ENST00000399306 SLC26A11Q86WA9 606 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 IFI44Q8TCB0 444 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 SLC37A2Q8TED4 501 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTNS-203ENST00000399306 CFAP36Q96G28 342 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 FMO2Q99518 471 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.32■□□□□ 0.36
CTNS-203ENST00000399306 COG4Q9H9E3 785 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 PRDM8Q9NQV8 689 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 IARS2Q9NSE4 1012 aaKnown RBP17.32■□□□□ 0.36
CTNS-203ENST00000399306 SIRPGQ9P1W8 387 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 HEBP2Q9Y5Z4 205 aa17.32■□□□□ 0.36
CTNS-203ENST00000399306 SPTBN2O15020 2390 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 UNC13CQ8NB66 2214 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 UBA6A0AVT1 1052 aaPredicted RBP17.31■□□□□ 0.36
CTNS-203ENST00000399306 SLC5A10A0PJK1 596 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 PDZK1P1A8MUH7 402 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 SNX2O60749 519 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 EML2O95834 649 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 ERVK-10P10266 1014 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 PKMP14618 531 aaKnown RBP17.31■□□□□ 0.36
CTNS-203ENST00000399306 CD9P21926 228 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 NDUFS1P28331 727 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 DNAJC3Q13217 504 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 SQSTM1Q13501 440 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 CAPRIN2Q6IMN6 1127 aaKnown RBP17.31■□□□□ 0.36
CTNS-203ENST00000399306 GUSBP11Q6P575 273 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 FAM83HQ6ZRV2 1179 aaPredicted RBP17.31■□□□□ 0.36
CTNS-203ENST00000399306 EFL1Q7Z2Z2 1120 aaKnown RBP17.31■□□□□ 0.36
CTNS-203ENST00000399306 SLCO6A1Q86UG4 719 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 DENND6AQ8IWF6 608 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms