RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 C9orf72Q96LT7 481 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 COPS8Q99627 209 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 RAB33BQ9H082 229 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 LZTFL1Q9NQ48 299 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 FBXO8Q9NRD0 319 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 ZDHHC3Q9NYG2 299 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 ZNF148Q9UQR1 794 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 ZKSCAN5Q9Y2L8 839 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 B3GALT1Q9Y5Z6 326 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 PIKFYVEQ9Y2I7 2098 aa14.57□□□□□ -0.08
SMIM11A-203ENST00000399299 MROH6A6NGR9 719 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 A8MU76 341 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 EFSO43281 561 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 SUN1O94901 812 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 MTHFD1P11586 935 aaKnown RBP14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 ATP1B2P14415 290 aaPredicted RBP14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 TYRP1P17643 537 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 TPH1P17752 444 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 PBLDP30039 288 aaPredicted RBP14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 GFERP55789 205 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 CDH17Q12864 832 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 SEMA5AQ13591 1074 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 SEPT6Q14141 434 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 POU6F1Q14863 301 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 SIX1Q15475 284 aaPredicted RBP14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 CCNG2Q16589 344 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 MANEAQ5SRI9 462 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 DRICH1Q6PGQ1 229 aaPredicted RBP14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 PCSK4Q6UW60 755 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 XKR5Q6UX68 686 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 CEACAM20Q6UY09 585 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 GPR150Q8NGU9 434 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 HM13Q8TCT9 377 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 ZFPM2Q8WW38 1151 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 MAIP1Q8WWC4 291 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 C1orf54Q8WWF1 131 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 RSC1A1Q92681 617 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 CDKN2AIPNLQ96HQ2 116 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 ZPBPQ9BS86 351 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 ETNK1Q9HBU6 452 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 SIDT1Q9NXL6 827 aaKnown RBP14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 KLHL3Q9UH77 587 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 PSMD13Q9UNM6 376 aa14.56□□□□□ -0.08
SMIM11A-203ENST00000399299 GCN1Q92616 2671 aaKnown RBP14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 C17orf113A0A1B0GUU1 675 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 EIF4E1BA6NMX2 242 aaKnown RBP14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 CCL22O00626 93 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 CAPN5O15484 640 aaPredicted RBP14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 IFNB1P01574 187 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 ACRV1P26436 265 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 ATP1A2P50993 1020 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 CACNG1Q06432 222 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 LAMB3Q13751 1172 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 SKIDA1Q1XH10 827 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 ANKS6Q68DC2 871 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 KLHL35Q6PF15 583 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 PRSS42Q7Z5A4 293 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 SERPINA9Q86WD7 417 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 OR52K1Q8NGK4 314 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 SLC39A7Q92504 469 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 TTC9Q92623 222 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 ZDHHC12Q96GR4 267 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 TGM7Q96PF1 710 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 TLR10Q9BXR5 811 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 SPRY4Q9C004 299 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 ZNF768Q9H5H4 540 aaKnown RBP14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 FAM96AQ9H5X1 160 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 PAK5Q9P286 719 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 RIMKLBQ9ULI2 386 aa14.55□□□□□ -0.08
SMIM11A-203ENST00000399299 HEATR9A2RTY3 570 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 E7EVH7 732 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 GAS8O95995 478 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 GSTM1P09488 218 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 SLC35G4P0C7Q5 338 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 GSTM4Q03013 218 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 ZRANB3Q5FWF4 1079 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 CAPRIN2Q6IMN6 1127 aaKnown RBP14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 TAB3Q8N5C8 712 aaPredicted RBP14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 CCDC89Q8N998 374 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 DNAAF3Q8N9W5 541 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 NKD1Q969G9 470 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 C12orf66Q96MD2 445 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 RANBP9Q96S59 729 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 INSM2Q96T92 566 aaPredicted RBP14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 CCM2Q9BSQ5 444 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 WWP1Q9H0M0 922 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 VPS37BQ9H9H4 285 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 RAB6BQ9NRW1 208 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 IMP3Q9NV31 184 aaKnown RBP14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 PIH1D1Q9NWS0 290 aaKnown RBP14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 SEMA5BQ9P283 1151 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 DRG1Q9Y295 367 aaKnown RBP14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 PPP2R2CQ9Y2T4 447 aa14.54□□□□□ -0.08
SMIM11A-203ENST00000399299 BAHCC1Q9P281 2608 aa14.53□□□□□ -0.08
SMIM11A-203ENST00000399299 POLR1CO15160 346 aaPredicted RBP14.53□□□□□ -0.08
SMIM11A-203ENST00000399299 AP2A2O94973 939 aa14.53□□□□□ -0.08
SMIM11A-203ENST00000399299 MSNP26038 577 aaKnown RBP14.53□□□□□ -0.08
SMIM11A-203ENST00000399299 NDUFS1P28331 727 aa14.53□□□□□ -0.08
SMIM11A-203ENST00000399299 LEPRP48357 1165 aaKnown RBP14.53□□□□□ -0.08
SMIM11A-203ENST00000399299 CDKN1CP49918 316 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms