RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 SEPT6Q14141 434 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 SLC1A5Q15758 541 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 HIF1AQ16665 826 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 DENND2CQ68D51 928 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 KCTD11Q693B1 232 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 PNCKQ6P2M8 343 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 CASC4Q6P4E1 433 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 TMEM71Q6P5X7 295 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 LRRC8BQ6P9F7 803 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 ZDHHC24Q6UX98 284 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 LIPIQ6XZB0 460 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 CENPUQ71F23 418 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 ZSWIM9Q86XI8 627 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 NRROSQ86YC3 692 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 BMPERQ8N8U9 685 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 PWWP2AQ96N64 755 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 SERPINB12Q96P63 405 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 TRIT1Q9H3H1 467 aaKnown RBP13.49□□□□□ -0.25
SEC13-205ENST00000397101 GPN2Q9H9Y4 310 aaPredicted RBP13.49□□□□□ -0.25
SEC13-205ENST00000397101 TAAR2Q9P1P5 351 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 PLAAQ9Y263 795 aa13.49□□□□□ -0.25
SEC13-205ENST00000397101 SPTBN1Q01082 2364 aaKnown RBP13.49□□□□□ -0.25
SEC13-205ENST00000397101 IGHV1OR21-1A0A087WYE8 117 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 PRR19A6NJB7 356 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 BHMG1C9JSJ3 638 aaPredicted RBP13.48□□□□□ -0.25
SEC13-205ENST00000397101 CTIFO43310 598 aaKnown RBP13.48□□□□□ -0.25
SEC13-205ENST00000397101 AVILO75366 819 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 ERLIN1O75477 346 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 PGLSO95336 258 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 PDHA1P08559 390 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 ELFN1P0C7U0 828 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 CTPS1P17812 591 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 GM2AP17900 193 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 MGAT1P26572 445 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 TNFRSF8P28908 595 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 CHRNA4P43681 627 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 NPY2RP49146 381 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 PDIA2Q13087 525 aaKnown RBP13.48□□□□□ -0.25
SEC13-205ENST00000397101 SIRPB2Q5JXA9 342 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 WDR93Q6P2C0 686 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 DPPA4Q7L190 304 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 NAGSQ8N159 534 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 BLOC1S5Q8TDH9 187 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 TADA1Q96BN2 335 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 NSMCE3Q96MG7 304 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 LGR4Q9BXB1 951 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 TEX101Q9BY14 249 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 TSPYL1Q9H0U9 437 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 CARS2Q9HA77 564 aaKnown RBP13.48□□□□□ -0.25
SEC13-205ENST00000397101 SAYSD1Q9NPB0 183 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 CASS4Q9NQ75 786 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 SAMD15Q9P1V8 674 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 PHTF1Q9UMS5 762 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 TMEM184BQ9Y519 407 aaPredicted RBP13.48□□□□□ -0.25
SEC13-205ENST00000397101 KCTD3Q9Y597 815 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 MAD1L1Q9Y6D9 718 aa13.48□□□□□ -0.25
SEC13-205ENST00000397101 LOC285095A0A1B0GVY8 99 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 SDR42E2A6NKP2 422 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 DUX1O43812 170 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 EPOP01588 193 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 SLC4A1P02730 911 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 CEACAM5P06731 702 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 MLNP12872 115 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 TEAD1P28347 426 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 CSF2RBP32927 897 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 ADRA1AP35348 466 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 FASLGP48023 281 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 MC2RQ01718 297 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 DHX9Q08211 1270 aaKnown RBP13.47□□□□□ -0.25
SEC13-205ENST00000397101 MAP7Q14244 749 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 IHHQ14623 411 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 HP1BP3Q5SSJ5 553 aaPredicted RBP13.47□□□□□ -0.25
SEC13-205ENST00000397101 FNBP1LQ5T0N5 605 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 TCTN3Q6NUS6 607 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 CEACAM20Q6UY09 585 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 RANBP10Q6VN20 620 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 ANKMY2Q8IV38 441 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 KLHDC8BQ8IXV7 354 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 EIF1ADQ8N9N8 165 aaKnown RBP13.47□□□□□ -0.25
SEC13-205ENST00000397101 PPHLN1Q8NEY8 458 aaKnown RBP13.47□□□□□ -0.25
SEC13-205ENST00000397101 FBXO8Q9NRD0 319 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 PHPT1Q9NRX4 125 aaPredicted RBP13.47□□□□□ -0.25
SEC13-205ENST00000397101 ZDHHC18Q9NUE0 388 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 ARGLU1Q9NWB6 273 aaPredicted RBP13.47□□□□□ -0.25
SEC13-205ENST00000397101 OCIAD1Q9NX40 245 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 PLEKHB1Q9UF11 243 aaPredicted RBP13.47□□□□□ -0.25
SEC13-205ENST00000397101 ICE1Q9Y2F5 2266 aa13.47□□□□□ -0.25
SEC13-205ENST00000397101 LOC101059948A0A1B0GTJ6 334 aa13.46□□□□□ -0.25
SEC13-205ENST00000397101 EFCAB7A8K855 629 aa13.46□□□□□ -0.25
SEC13-205ENST00000397101 ANKRD66B4E2M5 251 aa13.46□□□□□ -0.25
SEC13-205ENST00000397101 TRAFD1O14545 582 aaPredicted RBP13.46□□□□□ -0.25
SEC13-205ENST00000397101 PPM1DO15297 605 aa13.46□□□□□ -0.25
SEC13-205ENST00000397101 HTRA2O43464 458 aaPredicted RBP13.46□□□□□ -0.25
SEC13-205ENST00000397101 PRKCGP05129 697 aa13.46□□□□□ -0.25
SEC13-205ENST00000397101 PIRTP0C851 137 aa13.46□□□□□ -0.25
SEC13-205ENST00000397101 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
SEC13-205ENST00000397101 RPL26P61254 145 aaKnown RBP13.46□□□□□ -0.25
SEC13-205ENST00000397101 BIRC2Q13490 618 aa13.46□□□□□ -0.25
SEC13-205ENST00000397101 POU6F1Q14863 301 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms