RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SLC46A2Q9BY10 475 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 CPEB1Q9BZB8 566 aaKnown RBP16.54■□□□□ 0.24
NUP50-202ENST00000396096 IL1RL2Q9HB29 575 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 RDH14Q9HBH5 336 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 ACTR3BQ9P1U1 418 aa16.54■□□□□ 0.24
NUP50-202ENST00000396096 CNOT6Q9ULM6 557 aaKnown RBP16.54■□□□□ 0.24
NUP50-202ENST00000396096 C15orf38-AP3S2A0A0A6YYH1 394 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 A0A1W2PRU2 124 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 NPIPB15A6NHN6 443 aaPredicted RBP16.53■□□□□ 0.24
NUP50-202ENST00000396096 C9JVG2 144 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 SYNCRIPO60506 623 aaKnown RBP16.53■□□□□ 0.24
NUP50-202ENST00000396096 BAIAP3O94812 1187 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 LINC00271P0C7V0 271 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 MSH3P20585 1137 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 ITGB8P26012 769 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 UFM1P61960 85 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 C18orf21Q32NC0 220 aaPredicted RBP16.53■□□□□ 0.24
NUP50-202ENST00000396096 C22orf39Q6P5X5 142 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 SCIMPQ6UWF3 145 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 ARPINQ7Z6K5 226 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 SFRP1Q8N474 314 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 CLDN19Q8N6F1 224 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 OR4F6Q8NGB9 312 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 GBP5Q96PP8 586 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 CEP44Q9C0F1 390 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 CCM2LQ9NUG4 571 aaPredicted RBP16.53■□□□□ 0.24
NUP50-202ENST00000396096 ELOVL2Q9NXB9 296 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 GMPR2Q9P2T1 348 aaKnown RBP16.53■□□□□ 0.24
NUP50-202ENST00000396096 PIKFYVEQ9Y2I7 2098 aa16.53■□□□□ 0.24
NUP50-202ENST00000396096 CCDC154A6NI56 674 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 MAP3K13O43283 966 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 TRIM16O95361 564 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 CBSLP0DN79 551 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 CBSP35520 551 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 CTSOP43234 321 aaPredicted RBP16.52■□□□□ 0.24
NUP50-202ENST00000396096 NFYCQ13952 458 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 CAPRIN1Q14444 709 aaKnown RBP16.52■□□□□ 0.24
NUP50-202ENST00000396096 SMU1Q2TAY7 513 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 SULT1C3Q6IMI6 304 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 TSPAN33Q86UF1 283 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 ZFAND4Q86XD8 727 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 PTRH1Q86Y79 214 aaKnown RBP16.52■□□□□ 0.24
NUP50-202ENST00000396096 DPP10Q8N608 796 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 PAF1Q8N7H5 531 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 ANKFN1Q8N957 763 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 FNDC5Q8NAU1 212 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 KREMEN2Q8NCW0 462 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 GPR26Q8NDV2 337 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 TTC16Q8NEE8 873 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 PROKR1Q8TCW9 393 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 EME1Q96AY2 570 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 ZNF597Q96LX8 424 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 CDK15Q96Q40 435 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 SUV39H2Q9H5I1 410 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 NSUN3Q9H649 340 aaKnown RBP16.52■□□□□ 0.24
NUP50-202ENST00000396096 ZDHHC3Q9NYG2 299 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 SUN2Q9UH99 717 aa16.52■□□□□ 0.24
NUP50-202ENST00000396096 EIF3FO00303 357 aaPredicted RBP16.52■□□□□ 0.23
NUP50-202ENST00000396096 LSM1O15116 133 aaKnown RBP16.52■□□□□ 0.23
NUP50-202ENST00000396096 ADH1AP07327 375 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 BMP2P12643 396 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 GJA1P17302 382 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 ITGB6P18564 788 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 IL12AP29459 219 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 HLA-FP30511 346 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 GRIA3P42263 894 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 NSG1P42857 185 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 STK19P49842 368 aaPredicted RBP16.52■□□□□ 0.23
NUP50-202ENST00000396096 HTR6P50406 440 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 EEFSECP57772 596 aaKnown RBP16.52■□□□□ 0.23
NUP50-202ENST00000396096 TTLL9Q3SXZ7 439 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 FUT11Q495W5 492 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 PAGE3Q5JUK9 113 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 CDKL4Q5MAI5 379 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 HMBOX1Q6NT76 420 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 IL27RAQ6UWB1 636 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 PRR23BQ6ZRT6 265 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 USP45Q70EL2 814 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 CMTM8Q8IZV2 173 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 VPS33AQ96AX1 596 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 TMEM79Q9BSE2 394 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 C1orf50Q9BV19 199 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 CD244Q9BZW8 370 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 YIPF3Q9GZM5 350 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 IPPKQ9H8X2 491 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 ASAH2Q9NR71 780 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 UBAP1Q9NZ09 502 aa16.52■□□□□ 0.23
NUP50-202ENST00000396096 MTCL1Q9Y4B5 1905 aaKnown RBP16.51■□□□□ 0.23
NUP50-202ENST00000396096 ZNF839A8K0R7 811 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 IFRD1O00458 451 aaPredicted RBP16.51■□□□□ 0.23
NUP50-202ENST00000396096 GRM6O15303 877 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 CXCL14O95715 111 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 CHRM1P11229 460 aaPredicted RBP16.51■□□□□ 0.23
NUP50-202ENST00000396096 HSPA7P48741 367 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 CDKL1Q00532 357 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 CREB5Q02930 508 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 PRKG2Q13237 762 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 INPP5AQ14642 412 aa16.51■□□□□ 0.23
NUP50-202ENST00000396096 PHKG1Q16816 387 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms