RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GLRX5Q86SX6 157 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 FAM72BQ86X60 149 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 MIER2Q8N344 545 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 FAM83FQ8NEG4 500 aaPredicted RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 ZHX1-C8orf76Q96EF9 292 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 IL1RL2Q9HB29 575 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 IARS2Q9NSE4 1012 aaKnown RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 PTGESO14684 152 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 CAPN5O15484 640 aaPredicted RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 F9P00740 461 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 AGXTP21549 392 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 LHX1P48742 406 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 NPY2RP49146 381 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 LIPEQ05469 1076 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 RAD51Q06609 339 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 RBM23Q86U06 439 aaKnown RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 ZDHHC13Q8IUH4 622 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 TMEM86AQ8N2M4 240 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 ZNF717Q9BY31 904 aaPredicted RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 SLC52A3Q9NQ40 469 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 RPRD1BQ9NQG5 326 aaKnown RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 MKLN1Q9UL63 735 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 YJEFN3A6XGL0 299 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 MSL3P1P0C860 447 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 RAP2AP10114 183 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 ALDH4A1P30038 563 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 ATN1P54259 1190 aaPredicted RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 BNC1Q01954 994 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 TRAF3Q13114 568 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 KCTD11Q693B1 232 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 STK32CQ86UX6 486 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 SVOPLQ8N434 492 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 PEX13Q92968 403 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 MAP6Q96JE9 813 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 SENP8Q96LD8 212 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 DUSP21Q9H596 190 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 TNFRSF12AQ9NP84 129 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 CRTAC1Q9NQ79 661 aa18.63■□□□□ 0.57
HOXC6-202ENST00000394331 OAS3Q9Y6K5 1087 aaKnown RBP18.63■□□□□ 0.57
HOXC6-202ENST00000394331 PDCD11Q14690 1871 aaKnown RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 OR5K3A6NET4 321 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 ZBTB24O43167 697 aaPredicted RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 CYP2B6P20813 491 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 YWHAQP27348 245 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 GGT5P36269 586 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 MRPL19P49406 292 aaKnown RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 CAPRIN1Q14444 709 aaKnown RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 CLCA4Q14CN2 919 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 VPS26BQ4G0F5 336 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 KIAA0319Q5VV43 1072 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 GET4Q7L5D6 327 aaPredicted RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 GIPC2Q8TF65 315 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 RNF145Q96MT1 663 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 SMOC2Q9H3U7 446 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 ZNF408Q9H9D4 720 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 DDIT4Q9NX09 232 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 PAQR5Q9NXK6 330 aaPredicted RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 PCDHGA10Q9Y5H3 936 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 FAM92AA1XBS5 289 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 ARHGAP33O14559 1287 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 SLC16A6O15403 523 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 TMCC2O75069 709 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 USP12O75317 370 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 PGK1P00558 417 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 CD6P30203 668 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 CXCR4P61073 352 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 LSM3P62310 102 aaKnown RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 GPLD1P80108 840 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 GPR50Q13585 617 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 ZC3H12BQ5HYM0 836 aaKnown RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 ZNF470Q6ECI4 717 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 ZNF438Q7Z4V0 828 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 SETD6Q8TBK2 473 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 C19orf60Q96EN9 201 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 SLC39A13Q96H72 371 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 RBM4BQ9BQ04 359 aaKnown RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 RBM4Q9BWF3 364 aaKnown RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 CCDC90BQ9GZT6 254 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 MAGEL2Q9UJ55 1249 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 FIS1Q9Y3D6 152 aa18.62■□□□□ 0.57
HOXC6-202ENST00000394331 ARIH1Q9Y4X5 557 aaPredicted RBP18.62■□□□□ 0.57
HOXC6-202ENST00000394331 MYO18AQ92614 2054 aaKnown RBP18.61■□□□□ 0.57
HOXC6-202ENST00000394331 SNX2O60749 519 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 HRH2P25021 359 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 CPT1AP50416 773 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 KIF19Q2TAC6 998 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 PUS10Q3MIT2 529 aaKnown RBP18.61■□□□□ 0.57
HOXC6-202ENST00000394331 VARS2Q5ST30 1063 aaKnown RBP18.61■□□□□ 0.57
HOXC6-202ENST00000394331 CNTN4Q8IWV2 1026 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 PARP16Q8N5Y8 322 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 SMOQ99835 787 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 NUP50Q9UKX7 468 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 PTCH2Q9Y6C5 1203 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 C17orf102A2RUQ5 167 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 HMX3A6NHT5 357 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 G3V2T6 193 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 IPO13O94829 963 aaKnown RBP18.61■□□□□ 0.57
HOXC6-202ENST00000394331 STMN1P16949 149 aa18.61■□□□□ 0.57
HOXC6-202ENST00000394331 OLIG2Q13516 323 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms