RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 LRRN4Q8WUT4 740 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 FAR1Q8WVX9 515 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 TTC25Q96NG3 672 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 IP6K3Q96PC2 410 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 GBP5Q96PP8 586 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 CSPG4P5Q96PW8 444 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 WDR77Q9BQA1 342 aaPredicted RBP9.4□□□□□ -0.9
IFT88-203ENST00000389373 ZSCAN5AQ9BUG6 496 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 NUP85Q9BW27 656 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 TRIM7Q9C029 511 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 ZFYVE1Q9HBF4 777 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 ATP13A2Q9NQ11 1180 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 IMP3Q9NV31 184 aaKnown RBP9.4□□□□□ -0.9
IFT88-203ENST00000389373 TAS2R14Q9NYV8 317 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 SERTAD3Q9UJW9 196 aa9.4□□□□□ -0.9
IFT88-203ENST00000389373 PTRH2Q9Y3E5 179 aaKnown RBP9.4□□□□□ -0.9
IFT88-203ENST00000389373 PCSK5Q92824 1860 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 CSMD1Q96PZ7 3565 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 ANKRD66B4E2M5 251 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 JRKO75564 520 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 IGHEP01854 428 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 BPIP17213 487 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 CES1P23141 567 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 FOLR3P41439 243 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 CD86P42081 329 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 PREPP48147 710 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 KCNK10P57789 538 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 RPL26P61254 145 aaKnown RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 ADCY2Q08462 1091 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 TMEM115Q12893 351 aaPredicted RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 CYP2A13Q16696 494 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 KHDC1Q4VXA5 237 aaKnown RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 TCP11X2Q5H9J9 407 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 CCDC122Q5T0U0 273 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 C1orf189Q5VU69 101 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 DUS1LQ6P1R4 473 aaKnown RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 FAM180AQ6UWF9 173 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 PSTKQ8IV42 348 aaKnown RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 ITLN2Q8WWU7 325 aaPredicted RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 EID2BQ96D98 161 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 LYSMD1Q96S90 227 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 GPR63Q9BZJ6 419 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 KLHL25Q9H0H3 589 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 CHST11Q9NPF2 352 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.39□□□□□ -0.91
IFT88-203ENST00000389373 HAUS2Q9NVX0 235 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 P4HTMQ9NXG6 502 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 SUCOQ9UBS9 1254 aaKnown RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 NDOR1Q9UHB4 597 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 RPL26L1Q9UNX3 145 aaKnown RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 KLF2Q9Y5W3 355 aaPredicted RBP9.39□□□□□ -0.91
IFT88-203ENST00000389373 F8P00451 2351 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 POLQO75417 2590 aa9.39□□□□□ -0.91
IFT88-203ENST00000389373 TRGV8A0A0C4DH27 118 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 A0A1W2PQJ5 194 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 CCDC78A2IDD5 438 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 TMEM191CA6NGB0 347 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 E7EQ34 232 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 MATN3O15232 486 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 MAP3K7O43318 606 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 ZNF749O43361 778 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 ALOX12BO75342 701 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 POP7O75817 140 aaKnown RBP9.38□□□□□ -0.91
IFT88-203ENST00000389373 NADKO95544 446 aaPredicted RBP9.38□□□□□ -0.91
IFT88-203ENST00000389373 TPM2P07951 284 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 IL1R2P27930 398 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 HADHAP40939 763 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 LMAN1P49257 510 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 FOXL2P58012 376 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 PRKAA1Q13131 559 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 NFE2L1Q14494 772 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 KRT33BQ14525 404 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 ZNF169Q14929 603 aaPredicted RBP9.38□□□□□ -0.91
IFT88-203ENST00000389373 SLC9A5Q14940 896 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 FAM182AQ5T1J6 154 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 FKBP15Q5T1M5 1219 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 TIGD7Q6NT04 549 aaPredicted RBP9.38□□□□□ -0.91
IFT88-203ENST00000389373 FAM83HQ6ZRV2 1179 aaPredicted RBP9.38□□□□□ -0.91
IFT88-203ENST00000389373 C11orf96Q7Z7L8 435 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 MRGPRGQ86SM5 289 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 AMZ2Q86W34 360 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 NEK11Q8NG66 645 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 OR4E2Q8NGC2 313 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 ARRDC2Q8TBH0 407 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 CPLX3Q8WVH0 158 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
IFT88-203ENST00000389373 MAGEB10Q96LZ2 347 aaPredicted RBP9.38□□□□□ -0.91
IFT88-203ENST00000389373 C12orf66Q96MD2 445 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 DHRS4Q9BTZ2 278 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 ADGRE3Q9BY15 652 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 BPIFA1Q9NP55 256 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 RAD18Q9NS91 495 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 MYO1AQ9UBC5 1043 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 FAM8A1Q9UBU6 413 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 SH3BGRL2Q9UJC5 107 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 BTRCQ9Y297 605 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 PIKFYVEQ9Y2I7 2098 aa9.38□□□□□ -0.91
IFT88-203ENST00000389373 GSAPA4D1B5 854 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 CCL21O00585 134 aa9.37□□□□□ -0.91
IFT88-203ENST00000389373 PRICKLE3O43900 615 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms