RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 FNDC3BQ53EP0 1204 aaKnown RBP19.15■□□□□ 0.66
SSU72-204ENST00000378726 OGFRL1Q5TC84 451 aaPredicted RBP19.15■□□□□ 0.66
SSU72-204ENST00000378726 UGT2A3Q6UWM9 527 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 FBXO39Q8N4B4 442 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 HCAR2Q8TDS4 363 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 PDLIM5Q96HC4 596 aaKnown RBP19.15■□□□□ 0.66
SSU72-204ENST00000378726 PLA2G2FQ9BZM2 168 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 ZDHHC3Q9NYG2 299 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 DKK3Q9UBP4 350 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 FIS1Q9Y3D6 152 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 REV3LO60673 3130 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 LRRC14BA6NHZ5 514 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 UBFD1O14562 309 aaKnown RBP19.15■□□□□ 0.66
SSU72-204ENST00000378726 PEX1O43933 1283 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 JUNP05412 331 aaKnown RBP19.15■□□□□ 0.66
SSU72-204ENST00000378726 HLA-EP13747 358 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 NFKBIAP25963 317 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 NSG1P42857 185 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 DYNC1I2Q13409 638 aaKnown RBP19.15■□□□□ 0.66
SSU72-204ENST00000378726 MACC1Q6ZN28 852 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 HSD11B1LQ7Z5J1 315 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 SFTPA1Q8IWL2 248 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 ICA1LQ8NDH6 482 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 LKAAEAR1Q8TD35 194 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 COPS8Q99627 209 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 TNFRSF12AQ9NP84 129 aa19.15■□□□□ 0.66
SSU72-204ENST00000378726 G3BP2Q9UN86 482 aaKnown RBP19.15■□□□□ 0.66
SSU72-204ENST00000378726 TBC1D3BA6NDS4 549 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 PABPC4LP0CB38 370 aaKnown RBP19.14■□□□□ 0.65
SSU72-204ENST00000378726 PIK3R1P27986 724 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 NUDT2P50583 147 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 CHN2P52757 468 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 FCHO2Q0JRZ9 810 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 RUNX3Q13761 415 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 LSM12Q3MHD2 195 aaKnown RBP19.14■□□□□ 0.65
SSU72-204ENST00000378726 SATL1Q86VE3 508 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 GPSM1Q86YR5 675 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 YAF2Q8IY57 180 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 TIFAQ96CG3 184 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 MYADMQ96S97 322 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 FAM83DQ9H4H8 585 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 SARDHQ9UL12 918 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 CDYLQ9Y232 598 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 DTNAQ9Y4J8 743 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 TRAF6Q9Y4K3 522 aa19.14■□□□□ 0.65
SSU72-204ENST00000378726 NCF1BA6NI72 391 aaPredicted RBP19.13■□□□□ 0.65
SSU72-204ENST00000378726 NCF1CA8MVU1 366 aaPredicted RBP19.13■□□□□ 0.65
SSU72-204ENST00000378726 KPNA3O00505 521 aaPredicted RBP19.13■□□□□ 0.65
SSU72-204ENST00000378726 NCF1P14598 390 aaPredicted RBP19.13■□□□□ 0.65
SSU72-204ENST00000378726 EIF4HQ15056 248 aaKnown RBP19.13■□□□□ 0.65
SSU72-204ENST00000378726 Q6ZVL8 140 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 SNX32Q86XE0 403 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 SCAMP4Q969E2 229 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 FAR2Q96K12 515 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 SCN8AQ9UQD0 1980 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 TRPC5OSA6NMA1 111 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 TLR1Q15399 786 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 HNRNPA1L2Q32P51 320 aaKnown RBP19.13■□□□□ 0.65
SSU72-204ENST00000378726 C9orf64Q5T6V5 341 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 PQLC1Q8N2U9 271 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 CPA6Q8N4T0 437 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 AFAP1L2Q8N4X5 818 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 TERB1Q8NA31 727 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 DRAXINQ8NBI3 349 aaPredicted RBP19.13■□□□□ 0.65
SSU72-204ENST00000378726 ULK4Q96C45 1275 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 ABHD8Q96I13 439 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 BTBD9Q96Q07 612 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 TSR3Q9UJK0 312 aaKnown RBP19.13■□□□□ 0.65
SSU72-204ENST00000378726 TMPRSS11EQ9UL52 423 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 PSMD13Q9UNM6 376 aa19.13■□□□□ 0.65
SSU72-204ENST00000378726 PPP6CO00743 305 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 OR6B1O95007 311 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 EEF1DP29692 281 aaKnown RBP19.12■□□□□ 0.65
SSU72-204ENST00000378726 GJA4P35212 333 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 ETV3P41162 512 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 HK3P52790 923 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 ZNF234Q14588 700 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 FBXO48Q5FWF7 155 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 GPRC6AQ5T6X5 926 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 NXNQ6DKJ4 435 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 DCUN1D1Q96GG9 259 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 ASB2Q96Q27 587 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 C15orf38-AP3S2A0A0A6YYH1 394 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 KLK8O60259 260 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 PRNPP04156 253 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 SMIM18P0DKX4 95 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 THRAP10827 490 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 PSMC3P17980 439 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 DGKAP23743 735 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 MSX2P35548 267 aaPredicted RBP19.12■□□□□ 0.65
SSU72-204ENST00000378726 OPRD1P41143 372 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 RGS4P49798 205 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 SH3BP2P78314 561 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 B4GALNT1Q00973 533 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 ADAM15Q13444 863 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 ANKS6Q68DC2 871 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 CES5AQ6NT32 575 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 ISLR2Q6UXK2 745 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 ARPINQ7Z6K5 226 aa19.12■□□□□ 0.65
SSU72-204ENST00000378726 DSELQ8IZU8 1212 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms