RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SNPHO15079 494 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 ANKRD26P1Q6NSI1 321 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 DPY19L2P1Q6NXN4 242 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 RD3Q7Z3Z2 195 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 C14orf80Q86SX3 495 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CILP2Q8IUL8 1156 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 EEF1AKMT1Q8WVE0 214 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 BIRC7Q96CA5 298 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 NODALQ96S42 347 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 OLFM1Q99784 485 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CRISPLD1Q9H336 500 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 MFSD1Q9H3U5 465 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 OSER1Q9NX31 292 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 MRPL39Q9NYK5 338 aaKnown RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 BTBD3Q9Y2F9 522 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 WBP11Q9Y2W2 641 aaKnown RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 NDST3O95803 873 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 GNPDA1P46926 289 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 NDST2P52849 883 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CDH12P55289 794 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SRP54P61011 504 aaKnown RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF678Q5SXM1 525 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 DENND5AQ6IQ26 1287 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 PDE12Q6L8Q7 609 aaKnown RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SOCS4Q8WXH5 440 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SLC45A3Q96JT2 553 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SAMD4AQ9UPU9 718 aaKnown RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SATB2Q9UPW6 733 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 OR2AG2A6NM03 316 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 PFKMP08237 780 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SLC35E2BP0CK96 405 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 RAP2AP10114 183 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 NFKB2Q00653 900 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 HMGCS1Q01581 520 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 MXD1Q05195 221 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 RAET1GQ6H3X3 334 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 RETSATQ6NUM9 610 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 GOLGA7Q7Z5G4 137 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 FGD2Q7Z6J4 655 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SVOPLQ8N434 492 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SMURF2Q9HAU4 748 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 TULP3O75386 442 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CLDN9O95484 217 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SNAP29O95721 258 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 ERMP1Q7Z2K6 904 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 NANOGNBQ7Z5D8 188 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 TMPRSS11BQ86T26 416 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 NPWQ8N729 165 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CORO1BQ9BR76 489 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 DHRS4Q9BTZ2 278 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 RHBGQ9H310 441 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CCSER2Q9H7U1 834 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 RPS6KB2Q9UBS0 482 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 EMCNQ9ULC0 261 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CORO2BQ9UQ03 480 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 A6NHS1 94 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 G3V2L1 256 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 SLC28A2O43868 658 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 OR1I1O60431 355 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 DIRAS1O95057 198 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 GLUD1P00367 558 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 C1RP00736 705 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 UMPSP11172 480 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 VBP1P61758 197 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 CYP27C1Q4G0S4 372 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 OGFRL1Q5TC84 451 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 GPR153Q6NV75 609 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 XKR5Q6UX68 686 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 LRRC49Q8IUZ0 686 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 KRTCAP2Q8N6L1 136 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 HJURPQ8NCD3 748 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 FCRL5Q96RD9 977 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 HEMK1Q9Y5R4 338 aaPredicted RBP6.46□□□□□ -1.38
SMC1A-202ENST00000375340 PMF1-BGLAPU3KQ54 211 aa6.46□□□□□ -1.38
SMC1A-202ENST00000375340 AHDC1Q5TGY3 1603 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PRSS56P0CW18 603 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CTSKP43235 329 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 ENTPD1P49961 510 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 RPL26P61254 145 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CLDN10P78369 228 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 GCNT6Q5T4J0 391 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 RAVER1Q8IY67 606 aaKnown RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CNIH3Q8TBE1 160 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 HM13Q8TCT9 377 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 USP7Q93009 1102 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 COPS8Q99627 209 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 C20orf27Q9GZN8 174 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 TNFRSF11BO00300 401 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 KPNA3O00505 521 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 XYLBO75191 536 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 NOS3P29474 1203 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PPP2R1BP30154 601 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PIGGQ5H8A4 983 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 SIX5Q8N196 739 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 PDPRQ8NCN5 879 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 MAPK15Q8TD08 544 aa6.45□□□□□ -1.38
SMC1A-202ENST00000375340 CRNNQ9UBG3 495 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 COL5A3P25940 1745 aaPredicted RBP6.45□□□□□ -1.38
SMC1A-202ENST00000375340 AP2A2O94973 939 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms