RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CGB1A6NKQ9 187 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 M0QYG6 137 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 KLF11O14901 512 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 HNRNPCL1O60812 293 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 HUS1O60921 280 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 NXPH3O95157 252 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 UNC5CO95185 931 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 TGDSO95455 350 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ATP6V1G2O95670 118 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 APOEP02649 317 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 MT-ND3P03897 115 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 HRGP04196 525 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 MYL3P08590 195 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 TROVE2P10155 538 aaKnown RBP eCLIP4.84□□□□□ -1.63
USP48-202ENST00000374730 MLNP12872 115 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 CCDC130P13994 396 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ADRA1DP25100 572 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 CNTFP26441 200 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ADORA2BP29275 332 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ALDH3A1P30838 453 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 SLC8A1P32418 973 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 GNL1P36915 607 aaPredicted RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 FDFT1P37268 417 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 MATKP42679 507 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 SERPINB9P50453 376 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 CRYBB1P53674 252 aaPredicted RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 AIF1P55008 147 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 YWHAGP61981 247 aaKnown RBP eCLIP4.84□□□□□ -1.63
USP48-202ENST00000374730 CDK16Q00536 496 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 GBE1Q04446 702 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 HNRNPA0Q13151 305 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 NAB1Q13506 487 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 BMPR2Q13873 1038 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 PARP6Q2NL67 630 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 KBTBD12Q3ZCT8 623 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ALFQ53S48 1182 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 FAM133BQ5BKY9 247 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 PPP6R3Q5H9R7 873 aaPredicted RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 GLRA4Q5JXX5 417 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 LGSNQ5TDP6 509 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 OTUD1Q5VV17 481 aaPredicted RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 KIAA1614Q5VZ46 1190 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 FAM91A1Q658Y4 838 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 STEAP4Q687X5 459 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 NCBP2-AS2Q69YL0 99 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 FCRLBQ6BAA4 426 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 SCYL2Q6P3W7 929 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 FAM47EQ6ZV65 393 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 CYS1Q717R9 158 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ZNF534Q76KX8 674 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 OTOAQ7RTW8 1153 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 TLK2Q86UE8 772 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 CAND1Q86VP6 1230 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 FAM228AQ86W67 206 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 LRRC6Q86X45 466 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 HACE1Q8IYU2 909 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ADGRF2Q8IZF7 708 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 VPS52Q8N1B4 723 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 PAF1Q8N7H5 531 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 APPL2Q8NEU8 664 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 RAB3IL1Q8TBN0 382 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 SLC2A14Q8TDB8 520 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 BRIX1Q8TDN6 353 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 TCP10LQ8TDR4 215 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 CLEC4CQ8WTT0 213 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ZNF75CPQ92670 426 aaPredicted RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 INPP5DQ92835 1189 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 NT5C3BQ969T7 300 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 NTAN1Q96AB6 310 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 KLHL29Q96CT2 875 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 MTBPQ96DY7 904 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 SPATA13Q96N96 652 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 CSPG4P5Q96PW8 444 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 TMEM237Q96Q45 408 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 NPY6RQ99463 290 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 HNRNPABQ99729 332 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 PAIP2Q9BPZ3 127 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 DUSP16Q9BY84 665 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 B3GNT5Q9BYG0 378 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 LRMDAQ9H2I8 198 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 SNX25Q9H3E2 840 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 DHX35Q9H5Z1 703 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 PLAC1Q9HBJ0 212 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 SLCO1B3Q9NPD5 702 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 SAR1AQ9NR31 198 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 ARHGEF3Q9NR81 526 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 PNPOQ9NVS9 261 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 FZD10Q9ULW2 581 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 PIN4Q9Y237 131 aaKnown RBP4.84□□□□□ -1.63
USP48-202ENST00000374730 CHKBQ9Y259 395 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 HEY1Q9Y5J3 304 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 IKBKGQ9Y6K9 419 aa4.84□□□□□ -1.63
USP48-202ENST00000374730 FRMPD3Q5JV73 1810 aa4.83□□□□□ -1.64
USP48-202ENST00000374730 C17orf102A2RUQ5 167 aa4.83□□□□□ -1.64
USP48-202ENST00000374730 FAM159BA6NKW6 160 aa4.83□□□□□ -1.64
USP48-202ENST00000374730 TRAFD1O14545 582 aaPredicted RBP4.83□□□□□ -1.64
USP48-202ENST00000374730 PTGESO14684 152 aa4.83□□□□□ -1.64
USP48-202ENST00000374730 HCRTO43612 131 aa4.83□□□□□ -1.64
USP48-202ENST00000374730 MFSD11O43934 449 aa4.83□□□□□ -1.64
USP48-202ENST00000374730 VPS4BO75351 444 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms