RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PHC1P78364 1004 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF846Q147U1 533 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 CSRP2Q16527 193 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 DPYSL2Q16555 572 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 MGAT5BQ3V5L5 792 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 LY6G5CQ5SRR4 150 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 PIP5KL1Q5T9C9 394 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 AGBL4Q5VU57 503 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TRIM72Q6ZMU5 477 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 AMIGO2Q86SJ2 522 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 FBXO27Q8NI29 283 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 FAM149B1Q96BN6 582 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ALKBH8Q96BT7 664 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TOE1Q96GM8 510 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 BTN2A3PQ96KV6 586 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 MRGPRX1Q96LB2 322 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 SORT1Q99523 831 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 NPHS2Q9NP85 383 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TMEM74BQ9NUR3 256 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 DUS2Q9NX74 493 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 LHX3Q9UBR4 397 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 WBP11Q9Y2W2 641 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TESMINQ9Y4I5 508 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 PCDHGB2Q9Y5G2 931 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 OTOGLQ3ZCN5 2332 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 CAPN8A6NHC0 703 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 KRT3P12035 628 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 KRT10P13645 584 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ADORA2BP29275 332 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 NOS2P35228 1153 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ETV4P43268 484 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ATXN1P54253 815 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 EIF4HQ15056 248 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 DLG2Q15700 870 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 CCNG2Q16589 344 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ATP13A4Q4VNC1 1196 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 PPP6R3Q5H9R7 873 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ATAD3BQ5T9A4 648 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 FAM102AQ5T9C2 384 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 KRT77Q7Z794 578 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 PRUNE1Q86TP1 453 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 ZSWIM9Q86XI8 627 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 GRPEL2Q8TAA5 225 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TRIB3Q96RU7 358 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 SEPT5Q99719 369 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 P2RY13Q9BPV8 354 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 WDR12Q9GZL7 423 aaKnown RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 TMCC3Q9ULS5 477 aa6.8□□□□□ -1.32
CSDE1-204ENST00000369530 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-204ENST00000369530 FAM170BA6NMN3 283 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF839A8K0R7 811 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 MDM4O15151 490 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 DYRK3O43781 588 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ACSL4O60488 711 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 TSPAN9O75954 239 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CALB1P05937 261 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 RALAP11233 206 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF26P17031 533 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 BCKDHBP21953 392 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 L1CAMP32004 1257 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF143P52747 638 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SLC12A1Q13621 1099 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 FGL2Q14314 439 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SQLEQ14534 574 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 DMC1Q14565 340 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ITPRIPL1Q6GPH6 555 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SLC13A5Q86YT5 568 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 RASGRP3Q8IV61 690 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 RHOT1Q8IXI2 618 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 APOPT1Q96IL0 206 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 GCNAQ96QF7 691 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ATXN3LQ9H3M9 355 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 LIN28AQ9H9Z2 209 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 PRSS16Q9NQE7 514 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 WSB2Q9NYS7 404 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 STMN3Q9NZ72 180 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 DKK4Q9UBT3 224 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 UGT2A1Q9Y4X1 527 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 KALRNO60229 2985 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 A0A087WXM4 84 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 A0A0B4J203 849 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 TCRBV7S2A1N4TA0A589 114 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 BCLAF3A2AJT9 711 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CLPXO76031 633 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 SERPINA6P08185 405 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 TYRP14679 529 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 NDUFV2P19404 249 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CHKAP35790 457 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ATP5C1P36542 298 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 ARL4CP56559 192 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 IFRD2Q12894 506 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 LMAN2Q12907 356 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 MTM1Q13496 603 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 NFE2L1Q14494 772 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 CDK10Q15131 360 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 TRIP10Q15642 601 aa6.79□□□□□ -1.32
CSDE1-204ENST00000369530 HADHQ16836 314 aaKnown RBP6.79□□□□□ -1.32
CSDE1-204ENST00000369530 GTF2IRD2BQ6EKJ0 949 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms