RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 IRAK2O43187 625 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 AKAP10O43572 662 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 RNASEH1O60930 286 aaKnown RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 LUC7L3O95232 432 aaKnown RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 AHSGP02765 367 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 FYNP06241 537 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 CHRM2P08172 466 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 PAEPP09466 180 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 ABCB4P21439 1286 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBXAS1P24557 533 aaPredicted RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 SLC8A1P32418 973 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 FMO5P49326 533 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 STK19P49842 368 aaPredicted RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 METAP1P53582 386 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 FKBP3Q00688 224 aaKnown RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 SHBQ15464 509 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 SMAD1Q15797 465 aaKnown RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 DCAF6Q58WW2 860 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 MS4A13Q5J8X5 152 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 MPP7Q5T2T1 576 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 C9orf64Q5T6V5 341 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 ZNF658Q5TYW1 1059 aaPredicted RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 RAP1GAP2Q684P5 730 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 ISM2Q6H9L7 571 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 RRAGAQ7L523 313 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 TAC4Q86UU9 113 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 CCDC117Q8IWD4 279 aaPredicted RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 APCDD1Q8J025 514 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 LGI2Q8N0V4 545 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 SCML4Q8N228 414 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 STK40Q8N2I9 435 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 AADATQ8N5Z0 425 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 EID2Q8N6I1 236 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 ENGASEQ8NFI3 743 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 FIBINQ8TAL6 211 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 JPH3Q8WXH2 748 aaPredicted RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 IRGQQ8WZA9 623 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 SLC35C1Q96A29 364 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 TTC17Q96AE7 1141 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 CNDP2Q96KP4 475 aaKnown RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 NT5C1BQ96P26 610 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 MOGAT1Q96PD6 335 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 DDX50Q9BQ39 737 aaKnown RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 CDH19Q9H159 772 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 KLC4Q9NSK0 619 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 RMND1Q9NWS8 449 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 DKK4Q9UBT3 224 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 SLCO3A1Q9UIG8 710 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 KIAA1257Q9ULG3 409 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 NAALADL1Q9UQQ1 740 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 APC2O95996 2303 aa5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 TDRD6O60522 2096 aaKnown RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 ANKRD11Q6UB99 2663 aaPredicted RBP5.3□□□□□ -1.56
RNU4-4P-201ENST00000364588 ITPR1Q14643 2758 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3DA0A087WVF3 549 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3IA0A087WXS9 549 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3EA0A087X179 549 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3KA0A087X1G2 549 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 EDDM13A0A1B0GTR0 161 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 A0A1W2PR77 199 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TARSL2A2RTX5 802 aaKnown RBP5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3FA6NER0 549 aaPredicted RBP5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 EIF4E1BA6NMX2 242 aaKnown RBP5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3LB9A6J9 549 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 CAPN9O14815 690 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 DFNA5O60443 496 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 PROP1O75360 226 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 RFPL1O75677 317 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 NXPH3O95157 252 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 MOCS3O95396 460 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 LDOC1O95751 146 aaPredicted RBP5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 IL1BP01584 269 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 APOEP02649 317 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 PRB1P04280 392 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3HP0C7X1 549 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 KRT5P13647 590 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 JUPP14923 745 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 PDGFRAP16234 1089 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 ITPKBP27987 946 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 MAT2AP31153 395 aaKnown RBP5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 ABCG1P45844 678 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 KCNJ5P48544 419 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 ADPRHP54922 357 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 SOX8P57073 446 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 LOXL3P58215 753 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 PITX1P78337 314 aaPredicted RBP5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 ECT2LQ008S8 904 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 SEMG2Q02383 582 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 CNGA2Q16280 664 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 POM121L1PQ3SYA9 428 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 CCDC40Q4G0X9 1142 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 RBM20Q5T481 1227 aaKnown RBP5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 SYPL2Q5VXT5 272 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3GQ6DHY5 549 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 SFRP4Q6FHJ7 346 aaPredicted RBP5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TBC1D3CQ6IPX1 549 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 KLHL10Q6JEL2 608 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 DENND1BQ6P3S1 775 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 TMPRSS12Q86WS5 348 aa5.29□□□□□ -1.56
RNU4-4P-201ENST00000364588 CHSY1Q86X52 802 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms