RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZDHHC3Q9NYG2 299 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 CPNE7Q9UBL6 633 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 ACSL6Q9UKU0 697 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 TCAF1Q9Y4C2 921 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.11■□□□□ 0.015e-10■□□□□ 10.2
VAPA-201ENST00000340541 PIKFYVEQ9Y2I7 2098 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 PDZK1P1A8MUH7 402 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 PLD2O14939 933 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 GAS8O95995 478 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 TCP1P17987 556 aaKnown RBP15.1■□□□□ 0.01
VAPA-201ENST00000340541 VCLP18206 1134 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 RPL10P27635 214 aaKnown RBP15.1■□□□□ 0.01
VAPA-201ENST00000340541 PRLHRP49683 370 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 VPS41P49754 854 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 INHBCP55103 352 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 CDK16Q00536 496 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 CACNG1Q06432 222 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 GPS1Q13098 491 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 BIRC2Q13490 618 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 NFE2L1Q14494 772 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 CLCA4Q14CN2 919 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 DBN1Q16643 649 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 ANKRD22Q5VYY1 191 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 METRNLQ641Q3 311 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 CCDC81Q6ZN84 652 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 USP53Q70EK8 1073 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 KCND1Q9NSA2 647 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 KCNK4Q9NYG8 393 aa15.1■□□□□ 0.01
VAPA-201ENST00000340541 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.1■□□□□ 0.01
VAPA-201ENST00000340541 PRAMEF33A0A0G2JMD5 474 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 MGAT4DA6NG13 374 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 OR52A4PA6NMU1 304 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 NVLO15381 856 aaKnown RBP15.09■□□□□ 0.01
VAPA-201ENST00000340541 TMEM63AO94886 807 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 ATP1B2P14415 290 aaPredicted RBP15.09■□□□□ 0.01
VAPA-201ENST00000340541 FNTAP49354 379 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 SESN2P58004 480 aaPredicted RBP15.09■□□□□ 0.01
VAPA-201ENST00000340541 CRADDP78560 199 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 GPLD1P80108 840 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 CLN3Q13286 438 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 LAMB3Q13751 1172 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 MAP9Q49MG5 647 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 ZNF658BQ4V348 819 aaPredicted RBP15.09■□□□□ 0.01
VAPA-201ENST00000340541 PCID2Q5JVF3 399 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 LRRC8BQ6P9F7 803 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 RAB11FIP2Q7L804 512 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 NLRP9Q7RTR0 991 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 TAS2R42Q7RTR8 314 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 PIM3Q86V86 326 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 CREG2Q8IUH2 290 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 FBXO39Q8N4B4 442 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 OR2L2Q8NH16 312 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 HEXDCQ8WVB3 486 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 CPT1BQ92523 772 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 PEX13Q92968 403 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 HDAC10Q969S8 669 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 SH3KBP1Q96B97 665 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 DCUN1D1Q96GG9 259 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 CCNL2Q96S94 520 aaPredicted RBP15.09■□□□□ 0.01
VAPA-201ENST00000340541 SLC38A3Q99624 504 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 EPB41L5Q9HCM4 733 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 CHRAC1Q9NRG0 131 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 TREX1Q9NSU2 369 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 TMEM9Q9P0T7 183 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 COL6A6A6NMZ7 2263 aa15.09■□□□□ 0.01
VAPA-201ENST00000340541 ZNF462Q96JM2 2506 aa15.08■□□□□ 0.01
VAPA-201ENST00000340541 IGHV5-10-1A0A0J9YXX1 117 aa15.08■□□□□ 0
VAPA-201ENST00000340541 LILRA5A6NI73 299 aa15.08■□□□□ 0
VAPA-201ENST00000340541 CFAP99D6REC4 459 aa15.08■□□□□ 0
VAPA-201ENST00000340541 ZW10O43264 779 aa15.08■□□□□ 0
VAPA-201ENST00000340541 GOT2P00505 430 aaKnown RBP15.08■□□□□ 0
VAPA-201ENST00000340541 RALBP11234 206 aa15.08■□□□□ 0
VAPA-201ENST00000340541 MGAT1P26572 445 aa15.08■□□□□ 0
VAPA-201ENST00000340541 PBLDP30039 288 aaPredicted RBP15.08■□□□□ 0
VAPA-201ENST00000340541 NPY2RP49146 381 aa15.08■□□□□ 0
VAPA-201ENST00000340541 EPHA4P54764 986 aa15.08■□□□□ 0
VAPA-201ENST00000340541 SEMA3AQ14563 771 aa15.08■□□□□ 0
VAPA-201ENST00000340541 FOXR1Q6PIV2 292 aa15.08■□□□□ 0
VAPA-201ENST00000340541 TMEM26Q6ZUK4 368 aa15.08■□□□□ 0
VAPA-201ENST00000340541 LILRA3Q8N6C8 439 aaPredicted RBP15.08■□□□□ 0
VAPA-201ENST00000340541 CLDN19Q8N6F1 224 aa15.08■□□□□ 0
VAPA-201ENST00000340541 AVL9Q8NBF6 648 aa15.08■□□□□ 0
VAPA-201ENST00000340541 PPHLN1Q8NEY8 458 aaKnown RBP15.08■□□□□ 0
VAPA-201ENST00000340541 MED8Q96G25 268 aa15.08■□□□□ 0
VAPA-201ENST00000340541 SGSM3Q96HU1 749 aa15.08■□□□□ 0
VAPA-201ENST00000340541 NAPGQ99747 312 aaPredicted RBP15.08■□□□□ 0
VAPA-201ENST00000340541 TBC1D10AQ9BXI6 508 aa15.08■□□□□ 0
VAPA-201ENST00000340541 B3GNT4Q9C0J1 378 aa15.08■□□□□ 0
VAPA-201ENST00000340541 IL22Q9GZX6 179 aa15.08■□□□□ 0
VAPA-201ENST00000340541 STN1Q9H668 368 aaKnown RBP15.08■□□□□ 0
VAPA-201ENST00000340541 UCK1Q9HA47 277 aa15.08■□□□□ 0
VAPA-201ENST00000340541 SLC40A1Q9NP59 571 aa15.08■□□□□ 0
VAPA-201ENST00000340541 POT1Q9NUX5 634 aa15.08■□□□□ 0
VAPA-201ENST00000340541 PDP2Q9P2J9 529 aa15.08■□□□□ 0
VAPA-201ENST00000340541 PSMD13Q9UNM6 376 aa15.08■□□□□ 0
VAPA-201ENST00000340541 GOLGA6L10A0A0M3HER8 536 aa15.07■□□□□ 0
VAPA-201ENST00000340541 KLHL33A6NCF5 533 aa15.07■□□□□ 0
VAPA-201ENST00000340541 B8ZZF3 427 aa15.07■□□□□ 0
VAPA-201ENST00000340541 J3QKU1 62 aa15.07■□□□□ 0
VAPA-201ENST00000340541 AP3B1O00203 1094 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms