RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 UCKL1Q9NWZ5 548 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TOR4AQ9NXH8 423 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 INTS6Q9UL03 887 aaKnown RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 MTCH2Q9Y6C9 303 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 ZNF292O60281 2723 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 WDR27A2RRH5 827 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 USP12O75317 370 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TRAPPC2P0DI81 140 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TRAPPC2BP0DI82 140 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TDGF1P13385 188 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TALDO1P37837 337 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 MAGEA11P43364 429 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 GRIA4P48058 902 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 RPL34P49207 117 aaKnown RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 SRP54P61011 504 aaKnown RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 IL1RL1Q01638 556 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 PRKCDQ05655 676 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 RIN1Q13671 783 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 LEXMQ3ZCV2 418 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 C6orf132Q5T0Z8 1188 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 AGAP9Q5VTM2 703 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 ANKRD34AQ69YU3 496 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.52□□□□□ -1.537e-9■■■□□ 18.5
CSDE1-202ENST00000339438 PAGE2Q7Z2X7 111 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 LINC00518Q8N0U6 118 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TMEM161BQ8NDZ6 487 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 OR9I1Q8NGQ6 314 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TRIM63Q969Q1 353 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 NXPE3Q969Y0 559 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 DMRTB1Q96MA1 342 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TWNKQ96RR1 684 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 RTP3Q9BQQ7 232 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CDADC1Q9BWV3 514 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 POLR3FQ9H1D9 316 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 MEAF6Q9HAF1 191 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 ANKHQ9HCJ1 492 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 WASH6PQ9NQA3 447 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 KMT5AQ9NQR1 393 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 PAK5Q9P286 719 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 DIMT1Q9UNQ2 313 aaKnown RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 WBP11Q9Y2W2 641 aaKnown RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 PCDHGA10Q9Y5H3 936 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 KIAA0100Q14667 2235 aaKnown RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 ZZEF1O43149 2961 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 SHROOM3Q8TF72 1996 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 SAGE2PA6NJ88 616 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TMEM189-UBE2V1I3L0A0 370 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TK2O00142 265 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 SLC1A7O00341 560 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 PLK4O00444 970 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 PTGESO14684 152 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 HNRNPDLO14979 420 aaKnown RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 ARPC2O15144 300 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 SEC24AO95486 1093 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 DLGAP3O95886 979 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TRUB2O95900 331 aaKnown RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 APRTP07741 180 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 HOXD4P09016 255 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CCDC159P0C7I6 412 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CYP2A6P11509 494 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 HOXB3P14651 431 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 HOXB1P14653 301 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 MAGP20916 626 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 HRH2P25021 359 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CSTF2P33240 577 aaKnown RBP eCLIP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CPT1AP50416 773 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 JAK3P52333 1124 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 ARSFP54793 590 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 OR2B6P58173 313 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CRADDP78560 199 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CD47Q08722 323 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 FADDQ13158 208 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 COLEC12Q5KU26 742 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 PM20D1Q6GTS8 502 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 FSTL4Q6MZW2 842 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CXCL17Q6UXB2 119 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 ZYG11AQ6WRX3 759 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 BNIPLQ7Z465 357 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 MAP4K3Q8IVH8 894 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 PYCR2Q96C36 320 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 FCRL3Q96P31 734 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-202ENST00000339438 ACOX2Q99424 681 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 RNF208Q9H0X6 261 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 FAM118AQ9NWS6 357 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 VTI1BQ9UEU0 232 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 CDYLQ9Y232 598 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 PDE10AQ9Y233 779 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 TMEM131Q92545 1883 aa5.52□□□□□ -1.53
CSDE1-202ENST00000339438 A0A1W2PQ72 361 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CENPXA8MT69 81 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 INO80B-WBP1J3KQ70 363 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 H2AFYO75367 372 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 KRT8P05787 483 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 DBTP11182 482 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 GPX3P22352 226 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SLC6A2P23975 617 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 SLC9A3P48764 834 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ALDH3A2P51648 485 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 PGGT1BP53609 377 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms