RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SIDT1Q9NXL6 827 aaKnown RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 EPHA6Q9UF33 1036 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 LNPEPQ9UIQ6 1025 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 KCND3Q9UK17 655 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 TMPRSS11EQ9UL52 423 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 PSMD13Q9UNM6 376 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 WDR37Q9Y2I8 494 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 AAR2Q9Y312 384 aaKnown RBP10.45□□□□□ -0.74
CAPN3-202ENST00000337571 KCTD3Q9Y597 815 aa10.45□□□□□ -0.74
CAPN3-202ENST00000337571 ZNF106Q9H2Y7 1883 aaKnown RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 hCG_1818297A0A087WSY0 165 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 UBA6A0AVT1 1052 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 C5orf60A6NFR6 353 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 PRR19A6NJB7 356 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 TERTO14746 1132 aaKnown RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 KIF1CO43896 1103 aaKnown RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 SPAG6O75602 509 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 KIAA0754O94854 1291 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 CRTAMO95727 393 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 DLGAP3O95886 979 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 AGTP01019 485 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 RALBP11234 206 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 FGF5P12034 268 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 ZNF28P17035 718 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 NELFEP18615 380 aaKnown RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 LPOP22079 712 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 PBLDP30039 288 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 COPS2P61201 443 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 PDE1BQ01064 536 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 TLE1Q04724 770 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 DMPKQ09013 629 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 TBX2Q13207 712 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 ERV3-1Q14264 604 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 RPE65Q16518 533 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 GPRC6AQ5T6X5 926 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 METRNLQ641Q3 311 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 PRSS42Q7Z5A4 293 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 C11orf96Q7Z7L8 435 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 LAPTM4BQ86VI4 370 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 DDHD1Q8NEL9 900 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 RSC1A1Q92681 617 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 DCUN1D1Q96GG9 259 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 OXNAD1Q96HP4 312 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 PPP1R2P1Q96PQ5 205 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 QKIQ96PU8 341 aaKnown RBP eCLIP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 GOLPH3Q9H4A6 298 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 ASB8Q9H765 288 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 ZNF71Q9NQZ8 489 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 IMP3Q9NV31 184 aaKnown RBP10.44□□□□□ -0.74
CAPN3-202ENST00000337571 HRASLS2Q9NWW9 162 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 ANAPC2Q9UJX6 822 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 CROTQ9UKG9 612 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 RARRES3Q9UL19 164 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 ACSL5Q9ULC5 683 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 COLEC10Q9Y6Z7 277 aa10.44□□□□□ -0.74
CAPN3-202ENST00000337571 MACROD2A1Z1Q3 448 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 PIPSLA2A3N6 862 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 MGAT4DA6NG13 374 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 APOC4-APOC2K7ER74 178 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 SMAPO00193 183 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 ARHGAP6O43182 974 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 LCA5LO95447 670 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 PRAMEF1O95521 474 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 APOC2P02655 101 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 SLC35G4P0C7Q5 338 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 PYGMP11217 842 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 RBL1P28749 1068 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 OAS2P29728 719 aaKnown RBP10.43□□□□□ -0.74
CAPN3-202ENST00000337571 HSD11B2P80365 405 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 ACY1Q03154 408 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 ADCY2Q08462 1091 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 NFE2L1Q14494 772 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 TAF1AQ15573 450 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-202ENST00000337571 DNTTIP2Q5QJE6 756 aaKnown RBP10.43□□□□□ -0.74
CAPN3-202ENST00000337571 C11orf63Q6NUN7 778 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 ZNF449Q6P9G9 518 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 DARS2Q6PI48 645 aaKnown RBP10.43□□□□□ -0.74
CAPN3-202ENST00000337571 BBS12Q6ZW61 710 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 DET1Q7L5Y6 550 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 KMT5CQ86Y97 462 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 CDKL3Q8IVW4 592 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-202ENST00000337571 CFAP206Q8IYR0 622 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 ZFPM2Q8WW38 1151 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 RNF31Q96EP0 1072 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 ABHD17AQ96GS6 310 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 FCRL4Q96PJ5 515 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 CD180Q99467 661 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 FICDQ9BVA6 458 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 GBA3Q9H227 469 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 SMOXQ9NWM0 555 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 PCDHA3Q9Y5H8 950 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 ARL5AQ9Y689 179 aa10.43□□□□□ -0.74
CAPN3-202ENST00000337571 IGHV5-51A0A0C4DH38 117 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 CFAP99D6REC4 459 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 MKRN2OSH3BPM6 223 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 KCNN4O15554 427 aa10.42□□□□□ -0.74
CAPN3-202ENST00000337571 ZNF189O75820 626 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-202ENST00000337571 SRP72O76094 671 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms