RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 AASSQ9UDR5 926 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 C3orf18Q9UK00 162 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 H0Y626 953 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 TRIM16O95361 564 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CHRNA1P02708 482 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ITIH1P19827 911 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 FMO3P31513 532 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 NR4A2P43354 598 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 DGKQP52824 942 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 EPS8Q12929 822 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CBX2Q14781 532 aaPredicted RBP13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CRY1Q16526 586 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 GALNT5Q7Z7M9 940 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CDYL2Q8N8U2 506 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 TMEM40Q8WWA1 233 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 FAM162AQ96A26 154 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 PCED1BQ96HM7 432 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CTRCQ99895 268 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 HGH1Q9BTY7 390 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ABHD16BQ9H3Z7 469 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CATSPERBQ9H7T0 1116 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 SLC52A3Q9NQ40 469 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ADGRE2Q9UHX3 823 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 NUDT5Q9UKK9 219 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ENPP3O14638 875 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 TEX28O15482 410 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ASNA1O43681 348 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 GLP2RO95838 553 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ANGPTL1O95841 491 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 GSNP06396 782 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CYP4B1P13584 511 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 MTHFD2P13995 350 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ZNF135P52742 658 aaPredicted RBP13.56□□□□□ -0.24
SYNE3-201ENST00000334258 FAM110CQ1W6H9 321 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 PLA2G4EQ3MJ16 856 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ATAD3BQ5T9A4 648 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 KIAA0319Q5VV43 1072 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 PM20D1Q6GTS8 502 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CXCL17Q6UXB2 119 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 DPF3Q92784 378 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 VMP1Q96GC9 406 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 RBM4BQ9BQ04 359 aaKnown RBP13.56□□□□□ -0.24
SYNE3-201ENST00000334258 RBM4Q9BWF3 364 aaKnown RBP13.56□□□□□ -0.24
SYNE3-201ENST00000334258 MIR1-1HGQ9H1L0 117 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CRTAC1Q9NQ79 661 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 POLR3BQ9NW08 1133 aaPredicted RBP13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ERVK-18Q9QC07 812 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 DNAJB9Q9UBS3 223 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 FAM47E-STBD1D6RA91 191 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 SLC7A4O43246 635 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 TBX1O43435 398 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 PIRTP0C851 137 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 WARSP23381 471 aaKnown RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 NFKB2Q00653 900 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 CAP1Q01518 475 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 SIM2Q14190 667 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 GRB14Q14449 540 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 DUSP28Q4G0W2 176 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 TIGD7Q6NT04 549 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 LGI2Q8N0V4 545 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 LINC01465Q8N7H1 131 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 PIK3C3Q8NEB9 887 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 OR2T12Q8NG77 320 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 OR6Q1Q8NGQ2 317 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 PPTC7Q8NI37 304 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 STAG3L4Q8TBR4 150 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 PPP1R2P1Q96PQ5 205 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 MBOAT4Q96T53 435 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 FEM1AQ9BSK4 669 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 ACTR8Q9H981 624 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 TMEM30AQ9NV96 361 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 DNMT3BQ9UBC3 853 aaKnown RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 TRIP12Q14669 1992 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 FAM234BA2RU67 622 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 EIF2S1P05198 315 aaKnown RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 IL12AP29459 219 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 SLC26A3P40879 764 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 AGTR2P50052 363 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 ST13P50502 369 aaKnown RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 GABARAPL2P60520 117 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 TSNQ15631 228 aaKnown RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 SLC14A2Q15849 920 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 HIST2H2ACQ16777 129 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 CYP2U1Q7Z449 544 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 CCDC117Q8IWD4 279 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 MICU2Q8IYU8 434 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 MFSD4AQ8N468 514 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 MCFD2Q8NI22 146 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 EMID1Q96A84 441 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 FCRL2Q96LA5 508 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 TMEM209Q96SK2 561 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 EPS8L2Q9H6S3 715 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 PAK1IP1Q9NWT1 392 aaPredicted RBP13.55□□□□□ -0.24
SYNE3-201ENST00000334258 GALPQ9UBC7 116 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 INVSQ9Y283 1065 aa13.55□□□□□ -0.24
SYNE3-201ENST00000334258 PCDHGA3Q9Y5H0 932 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms