RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 DCAF4L2Q8NA75 395 aa11.38□□□□□ -0.59
PTPN2-201ENST00000309660 TOP1MTQ969P6 601 aa11.38□□□□□ -0.59
PTPN2-201ENST00000309660 RNF145Q96MT1 663 aa11.38□□□□□ -0.59
PTPN2-201ENST00000309660 GPATCH1Q9BRR8 931 aaKnown RBP11.38□□□□□ -0.59
PTPN2-201ENST00000309660 ZDHHC6Q9H6R6 413 aa11.38□□□□□ -0.59
PTPN2-201ENST00000309660 LEF1Q9UJU2 399 aaPredicted RBP11.38□□□□□ -0.59
PTPN2-201ENST00000309660 OAZ3Q9UMX2 235 aa11.38□□□□□ -0.59
PTPN2-201ENST00000309660 CASP8AP2Q9UKL3 1982 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ASPDHA6ND91 283 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 MTX2O75431 263 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 BPIP17213 487 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 NFKBIAP25963 317 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 RPL5P46777 297 aaKnown RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 PSMD8P48556 350 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 CLCN4P51793 760 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 RCAN2Q14206 197 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 CPSF6Q16630 551 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 NANOGP8Q6NSW7 305 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 SBSNQ6UWP8 590 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 HACD2Q6Y1H2 254 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ZNF786Q8N393 782 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 MINDY1Q8N5J2 469 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 PROKR1Q8TCW9 393 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ADAMTS19Q8TE59 1207 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 CORO1BQ9BR76 489 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 FAM126AQ9BYI3 521 aaPredicted RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 SOX17Q9H6I2 414 aaPredicted RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ABCB8Q9NUT2 735 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 DDX18Q9NVP1 670 aaKnown RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 NUDT4Q9NZJ9 180 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 OPTCQ9UBM4 332 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 GNPTGQ9UJJ9 305 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ANKRD36A6QL64 1941 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 CLGNO14967 610 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 FKTNO75072 461 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 MATN4O95460 622 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 TRBC1P01850 177 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 GNAO1P09471 354 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ACRP10323 421 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 WEE1P30291 646 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 AP1S1P61966 158 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 POM121L1PQ3SYA9 428 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 TMEM126BQ8IUX1 230 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 TMEM125Q96AQ2 219 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 YME1L1Q96TA2 773 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 NUSAP1Q9BXS6 441 aaKnown RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ATP13A3Q9H7F0 1226 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 MAGEE1Q9HCI5 957 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 TMEM39AQ9NV64 488 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 NPIPB15A6NHN6 443 aaPredicted RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 HTRA2O43464 458 aaPredicted RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 IGSF6O95976 241 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 LRG1P02750 347 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 PABPC4LP0CB38 370 aaKnown RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ILF2Q12905 390 aaKnown RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 BOP1Q14137 746 aaKnown RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 C8orf82Q6P1X6 216 aaPredicted RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 CYP20A1Q6UW02 462 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 GAREM2Q75VX8 874 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ERMP1Q7Z2K6 904 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 METTL25Q8N6Q8 603 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 PYCR2Q96C36 320 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 HHIPL1Q96JK4 782 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 ZNF382Q96SR6 550 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 TBCDQ9BTW9 1192 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 THUMPD3Q9BV44 507 aaKnown RBP11.37□□□□□ -0.59
PTPN2-201ENST00000309660 P2RY12Q9H244 342 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 CIDEBQ9UHD4 219 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 RNF11Q9Y3C5 154 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 PCDHB1Q9Y5F3 818 aa11.37□□□□□ -0.59
PTPN2-201ENST00000309660 OR7A17O14581 309 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 FZD6O60353 706 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 UGT2B4P06133 528 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 ZNF23P17027 643 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 SERPINA4P29622 427 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 AKT1P31749 480 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 PABPC1LQ4VXU2 614 aaKnown RBP11.36□□□□□ -0.59
PTPN2-201ENST00000309660 DGKKQ5KSL6 1271 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 OGFOD2Q6N063 350 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 CERS6Q6ZMG9 384 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 SNX20Q7Z614 316 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 ZSWIM9Q86XI8 627 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 CMTR2Q8IYT2 770 aaKnown RBP11.36□□□□□ -0.59
PTPN2-201ENST00000309660 OFCC1Q8IZS5 231 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 TMEM199Q8N511 208 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 MAGEE2Q8TD90 523 aaPredicted RBP11.36□□□□□ -0.59
PTPN2-201ENST00000309660 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 OSBPL11Q9BXB4 747 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 CCM2LQ9NUG4 571 aaPredicted RBP11.36□□□□□ -0.59
PTPN2-201ENST00000309660 ELOVL2Q9NXB9 296 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 SPG21Q9NZD8 308 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 ACTR3BQ9P1U1 418 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.36□□□□□ -0.59
PTPN2-201ENST00000309660 OR51B4Q9Y5P0 310 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 SEC22BO75396 215 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 OTCP00480 354 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 CHRM1P11229 460 aaPredicted RBP11.36□□□□□ -0.59
PTPN2-201ENST00000309660 DGKAP23743 735 aa11.36□□□□□ -0.59
PTPN2-201ENST00000309660 OR4D2P58180 307 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms