RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 PSMD3O43242 534 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 LIASO43766 372 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 KALRNO60229 2985 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 AP2A1O95782 977 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 CCDC175P0C221 793 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 PRSS56P0CW18 603 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 CAPZBP47756 277 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 CDKN1CP49918 316 aaPredicted RBP16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 FOXM1Q08050 763 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 SDK2Q58EX2 2172 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 PCSK4Q6UW60 755 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 FAM92BQ6ZTR7 304 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 SNX20Q7Z614 316 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 PRUNE1Q86TP1 453 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 RBM12BQ8IXT5 1001 aaKnown RBP16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 KLHDC8BQ8IXV7 354 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 BMPERQ8N8U9 685 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 DNAAF3Q8N9W5 541 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 C12orf66Q96MD2 445 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 B3GNT4Q9C0J1 378 aa16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 ZNF106Q9H2Y7 1883 aaKnown RBP16.69■□□□□ 0.26
HMGCLL1-202ENST00000308161 E7EVH7 732 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 POLR1CO15160 346 aaPredicted RBP16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 KIF1CO43896 1103 aaKnown RBP16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 SLC35G4P0C7Q5 338 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 MC2RQ01718 297 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 LY6DQ14210 128 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 GSE1Q14687 1217 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 CCDC38Q502W7 563 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 MEI1Q5TIA1 1274 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 METRNLQ641Q3 311 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 CEACAM20Q6UY09 585 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 CFAP206Q8IYR0 622 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 CACNA2D3Q8IZS8 1091 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 ZSCAN1Q8NBB4 408 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 SPDYE1Q8NFV5 336 aaPredicted RBP16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 OR52K1Q8NGK4 314 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 OR2L2Q8NH16 312 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 SNRNP27Q8WVK2 155 aaKnown RBP16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 NKD1Q969G9 470 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 RTP4Q96DX8 246 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 PCDHGA4Q9Y5G9 962 aa16.68■□□□□ 0.26
HMGCLL1-202ENST00000308161 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 RAD1O60671 282 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 C9P02748 559 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 MTHFD1P11586 935 aaKnown RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 ETS1P14921 441 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 WT1P19544 449 aaPredicted RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 STIP1P31948 543 aaKnown RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 PPP1CAP62136 330 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 CYP4F2P78329 520 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 KRT33BQ14525 404 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 OASLQ15646 514 aaKnown RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 BCL7AQ4VC05 210 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 CACHD1Q5VU97 1274 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 PPP1R21Q6ZMI0 780 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 LINC00523Q86TU6 105 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 SERPINA9Q86WD7 417 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 LILRA3Q8N6C8 439 aaPredicted RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 CCDC89Q8N998 374 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 TTC9Q92623 222 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 ZDHHC12Q96GR4 267 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 ELMO2Q96JJ3 720 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 TEFMQ96QE5 360 aaKnown RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 INSM2Q96T92 566 aaPredicted RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 ETNK1Q9HBU6 452 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 NLE1Q9NVX2 485 aaPredicted RBP16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 ZDHHC3Q9NYG2 299 aa16.67■□□□□ 0.26
HMGCLL1-202ENST00000308161 TK2O00142 265 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 SGTAO43765 313 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 GAS8O95995 478 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 ANKRD34CP0C6C1 535 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 ATP1B2P14415 290 aaPredicted RBP16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 PRLHRP49683 370 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 SH3BP2P78314 561 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 GPR33Q49SQ1 333 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 LRRC8AQ8IWT6 810 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 LSM14AQ8ND56 463 aaKnown RBP16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 STYXQ8WUJ0 223 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 HEXDCQ8WVB3 486 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 CDKN2AIPNLQ96HQ2 116 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 RMDN2Q96LZ7 410 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 FRMD8P1Q9BZ68 369 aaPredicted RBP16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 FBXO8Q9NRD0 319 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 RAB6BQ9NRW1 208 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 ACSL5Q9ULC5 683 aa16.66■□□□□ 0.26
HMGCLL1-202ENST00000308161 FASNP49327 2511 aaKnown RBP16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 OR51F1A6NGY5 319 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 AGAP14A8MT82 685 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 NRDCO43847 1150 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 C1QL1O75973 258 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 STK17BO94768 372 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 LIFP15018 202 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 MSNP26038 577 aaKnown RBP16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 ACRV1P26436 265 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 FDFT1P37268 417 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 GRIA1P42261 906 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 CACNG1Q06432 222 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 C19orf57Q0VDD7 668 aa16.65■□□□□ 0.26
HMGCLL1-202ENST00000308161 CDH17Q12864 832 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms