RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PLATP00750 562 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 PDYNP01213 254 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 BTG3Q14201 252 aaPredicted RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 KRBOX4Q5JUW0 171 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 SLC44A3Q8N4M1 653 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 UCK2Q9BZX2 261 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 PCDHGA8Q9Y5G5 932 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 A8MUI8 341 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ARPC2O15144 300 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 CAND1Q86VP6 1230 aaKnown RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 LMLNQ96KR4 655 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 TMED9Q9BVK6 235 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 OR10A4Q9H209 315 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 NARFQ9UHQ1 456 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 TESMINQ9Y4I5 508 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 CPSF1Q10570 1443 aaKnown RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 ABLIM1O14639 778 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 CTHP32929 405 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 FAM35AQ86V20 835 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
TRIM56-201ENST00000306085 GRIN2DO15399 1336 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 OR12D2P58182 307 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 IQCHQ86VS3 1027 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 TOMM5Q8N4H5 51 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 MREGQ8N565 214 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 HDAC7Q8WUI4 952 aa13.26□□□□□ -0.29
TRIM56-201ENST00000306085 RENP00797 406 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 HERV-K104P61576 105 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 CNDP2Q96KP4 475 aaKnown RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 PNPLA7Q6ZV29 1317 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 C1QTNF3-AMACRE9PGA6 284 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 ZSCAN5DPP0CG00 497 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 PET100P0DJ07 73 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 TIE1P35590 1138 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 ERVK-9P63128 1117 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 BST1Q10588 318 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 C16orf86Q6ZW13 317 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 PIWIL1Q96J94 861 aaKnown RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 POPDC2Q9HBU9 364 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 ADAMDEC1O15204 470 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 HOXB6P17509 224 aaKnown RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 MSX1P28360 303 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 ELAVL2Q12926 359 aaKnown RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 LACRTQ9GZZ8 138 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 PSEN1P49768 467 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 RELL1Q8IUW5 271 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 BBS1Q8NFJ9 593 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 NINJ1Q92982 152 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 SUPT20HL2P0C7V6 817 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 SLC6A3Q01959 620 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 RRP1BQ14684 758 aaKnown RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 PARP6Q2NL67 630 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 TSSK3Q96PN8 268 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 FUZQ9BT04 418 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 TMEM121BQ9BXQ6 578 aaPredicted RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 RNASEH2BQ5TBB1 312 aaKnown RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 LRRN1Q6UXK5 716 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 ARRDC4Q8NCT1 418 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 PROKR2Q8NFJ6 384 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 SEC14L1Q92503 715 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 SAV1Q9H4B6 383 aaPredicted RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 A0A1B0GV50 99 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 HDAC3O15379 428 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 HCKP08631 526 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 PLEKHG6Q3KR16 790 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 SWT1Q5T5J6 900 aaKnown RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 KCT2Q8NC54 265 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 PEX13Q92968 403 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 USP20Q9Y2K6 914 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF609O15014 1411 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 IQCF5A8MTL0 148 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 GRK6P43250 576 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 MAD2L1BPQ15013 274 aaPredicted RBP13.25□□□□□ -0.29
TRIM56-201ENST00000306085 C7orf61Q8IZ16 206 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 JAGN1Q8N5M9 183 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 S100A14Q9HCY8 104 aa13.25□□□□□ -0.29
TRIM56-201ENST00000306085 CACNB4O00305 520 aaPredicted RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ICAM1P05362 532 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 NRSN1Q8IZ57 195 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 C1orf109Q9NX04 203 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 WASF3Q9UPY6 502 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 NRKQ7Z2Y5 1582 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 DISC1C4P0D8 188 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 APOC4-APOC2K7ER74 178 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 APOC2P02655 101 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 PRR5P85299 388 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 E2F1Q01094 437 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 KLHL35Q6PF15 583 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 DEFB106AQ8N104 65 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 NSUN4Q96CB9 384 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 TSNAXQ99598 290 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CTBP1Q13363 440 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 CEP68Q76N32 757 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 PIWIL4Q7Z3Z4 852 aaKnown RBP13.24□□□□□ -0.29
TRIM56-201ENST00000306085 TMPRSS9Q7Z410 1059 aa13.24□□□□□ -0.29
TRIM56-201ENST00000306085 ANKRD46Q86W74 232 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms