RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 DCST1Q5T197 706 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 SLC9A6Q92581 669 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 NTPCRQ9BSD7 190 aaKnown RBP13.78□□□□□ -0.2
PRKCB-201ENST00000303531 OSER1Q9NX31 292 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 ZNF536O15090 1300 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 KELP23276 732 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 TGFBR2P37173 567 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 DPYSL2Q16555 572 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 DCAF12L1Q5VU92 463 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 PRR23CQ6ZRP0 262 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 MPP5Q8N3R9 675 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 SLC17A6Q9P2U8 582 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 TCF4P15884 667 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 PSMA1P25786 263 aaKnown RBP13.78□□□□□ -0.2
PRKCB-201ENST00000303531 SLC9B1Q4ZJI4 515 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 MAF1Q9H063 256 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 HMGXB4Q9UGU5 601 aa13.78□□□□□ -0.2
PRKCB-201ENST00000303531 MAPK12P53778 367 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.77□□□□□ -0.2
PRKCB-201ENST00000303531 SATL1Q86VE3 508 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 CRYBG2Q8N1P7 616 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 TAS2R1Q9NYW7 299 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 ZNF214Q9UL59 606 aaPredicted RBP13.77□□□□□ -0.2
PRKCB-201ENST00000303531 A0A1W2PQ67 120 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 ENPP3O14638 875 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 CHST10O43529 356 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 ESR1P03372 595 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 PCCBP05166 539 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 ADGRE1Q14246 886 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 CXorf57Q6NSI4 855 aaKnown RBP13.77□□□□□ -0.2
PRKCB-201ENST00000303531 TMEM214Q6NUQ4 689 aaKnown RBP13.77□□□□□ -0.2
PRKCB-201ENST00000303531 RTL4Q6ZR62 310 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 FAM92BQ6ZTR7 304 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 DNASE1L2Q92874 299 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 NODALQ96S42 347 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 BCAS3Q9H6U6 928 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 CCDC177Q9NQR7 707 aaPredicted RBP13.77□□□□□ -0.2
PRKCB-201ENST00000303531 C3P01024 1663 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 E7ENX8 843 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 SYN3O14994 580 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 FKTNO75072 461 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 CDH12P55289 794 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 AP1S1P61966 158 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 BEND5Q7L4P6 421 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 OXCT2Q9BYC2 517 aaPredicted RBP13.77□□□□□ -0.2
PRKCB-201ENST00000303531 MFSD1Q9H3U5 465 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 COQ10BQ9H8M1 238 aa13.77□□□□□ -0.2
PRKCB-201ENST00000303531 AFDNP55196 1824 aaKnown RBP13.77□□□□□ -0.2
PRKCB-201ENST00000303531 ARHGEF33A8MVX0 844 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 PTGER3P43115 390 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 VARS2Q5ST30 1063 aaKnown RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 KIAA0930Q6ICG6 404 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 SVOPLQ8N434 492 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 ZNF516Q92618 1163 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 CXorf21Q9HAI6 301 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 SLC35C2Q9NQQ7 365 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 TRNAU1APQ9NX07 287 aaKnown RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 ARL5AQ9Y689 179 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 MAGEB17A8MXT2 336 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 STX16-NPEPL1H3BU86 382 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 CXCR6O00574 342 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 STX16O14662 325 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 ADAMDEC1O15204 470 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 LAPTM5Q13571 262 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 LARS2Q15031 903 aaKnown RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 TAF1AQ15573 450 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 C5orf22Q49AR2 442 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 PSRC1Q6PGN9 363 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 DAW1Q8N136 415 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 MKL2Q9ULH7 1088 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 TESMINQ9Y4I5 508 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 FAM25EA8MYX2 175 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 LGR5O75473 907 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 OGNP20774 298 aaKnown RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 GPD2P43304 727 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 CCR10P46092 362 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 WDR4P57081 412 aaKnown RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 ABATP80404 500 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 PLET1Q6UQ28 207 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 P2RY8Q86VZ1 359 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 CHCHD6Q9BRQ6 235 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 STARP49675 285 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 FAM174BQ3ZCQ3 159 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 CWF19L1Q69YN2 538 aaKnown RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 BICRALQ6AI39 1079 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 ART5Q96L15 291 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 NUSAP1Q9BXS6 441 aaKnown RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 FZD8Q9H461 694 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 POLR3BQ9NW08 1133 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-201ENST00000303531 EURLQ9NYK6 297 aa13.77□□□□□ -0.21
PRKCB-201ENST00000303531 FAM240BA0A1B0GVZ2 78 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 TCRBV7S3A2A0A539 114 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 TULP2O00295 520 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 RNF19BQ6ZMZ0 732 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 DIRAS2Q96HU8 199 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 PDE10AQ9Y233 779 aa13.76□□□□□ -0.21
PRKCB-201ENST00000303531 LAMP2P13473 410 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms