RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TRPC4APQ8TEL6 797 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 FAM129BQ96TA1 746 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 TRMT61BQ9BVS5 477 aaKnown RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 FAM126AQ9BYI3 521 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 UBAP1Q9NZ09 502 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 CFAP99D6REC4 459 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 H0Y858 1186 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 S100BP04271 92 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-202ENST00000297979 CBSLP0DN79 551 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 CBSP35520 551 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 GRIA2P42262 883 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 AGTR2P50052 363 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 ELP6Q0PNE2 266 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 ACOX1Q15067 660 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 CLEC6AQ6EIG7 209 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 DSG4Q86SJ6 1040 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 NRSN1Q8IZ57 195 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 CLYBLQ8N0X4 340 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 KLC4Q9NSK0 619 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 TAS2R1Q9NYW7 299 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 PCTPQ9UKL6 214 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 B2RBV5 119 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 RAD51BO15315 384 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 SPINT1O43278 529 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 MTHFRP42898 656 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 PPP1R3AQ16821 1122 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 FBXO48Q5FWF7 155 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 DET1Q7L5Y6 550 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 DDHD1Q8NEL9 900 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 WRAP53Q9BUR4 548 aaKnown RBP14.04□□□□□ -0.16
C9orf3-202ENST00000297979 CLDND1Q9NY35 253 aa14.04□□□□□ -0.16
C9orf3-202ENST00000297979 FADS2P1A8MWK0 482 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 PPP6CO00743 305 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 WNT9AO14904 365 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 MGRN1O60291 552 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 APODP05090 189 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 EPHX1P07099 455 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 FGF4P08620 206 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 KLF10Q13118 480 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 CCDC92Q53HC0 331 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 EGFLAMQ63HQ2 1017 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 ZCCHC8Q6NZY4 707 aaKnown RBP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 NUDT18Q6ZVK8 323 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 RAVER1Q8IY67 606 aaKnown RBP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 ACTRT2Q8TDY3 377 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 AGAP11Q8TF27 550 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 CMTM5Q96DZ9 223 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 VPS35Q96QK1 796 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 RPP25Q9BUL9 199 aaKnown RBP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 CADM1Q9BY67 442 aaKnown RBP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 ZNF576Q9H609 170 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 SEMA4BQ9NPR2 832 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 DYRK4Q9NR20 520 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 HCN2Q9UL51 889 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 OARD1Q9Y530 152 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 C1QTNF3-AMACRE9PGA6 284 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 AZIN1O14977 448 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 MTX2O75431 263 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 MLYCDO95822 493 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 ADRB3P13945 408 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 GM2AP17900 193 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 MSH3P20585 1137 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 PRDX6P30041 224 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 CCR7P32248 378 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 NAA25Q14CX7 972 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 FAAH2Q6GMR7 532 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 TMPRSS6Q8IU80 811 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 CPSF7Q8N684 471 aaKnown RBP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 PDPRQ8NCN5 879 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 AP2M1Q96CW1 435 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 COQ10AQ96MF6 247 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 ZNF385DQ9H6B1 395 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 ZDHHC4Q9NPG8 344 aa14.03□□□□□ -0.16
C9orf3-202ENST00000297979 EIF2B4Q9UI10 523 aaKnown RBP14.03□□□□□ -0.16
C9orf3-202ENST00000297979 EIF3FO00303 357 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-202ENST00000297979 ARNTLO00327 626 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 AREL1O15033 823 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 SLC22A2O15244 555 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 FFAR2O15552 330 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 AP2A2O94973 939 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 ENO3P13929 434 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-202ENST00000297979 AOAHP28039 575 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 MNAT1P51948 309 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 COPAP53621 1224 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 UGT3A2Q3SY77 523 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 KANK2Q63ZY3 851 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 TMEM198Q66K66 360 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 CYHR1Q6ZMK1 362 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 MMAAQ8IVH4 418 aaKnown RBP14.02□□□□□ -0.16
C9orf3-202ENST00000297979 POU5F2Q8N7G0 328 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 RBM15BQ8NDT2 890 aaKnown RBP14.02□□□□□ -0.16
C9orf3-202ENST00000297979 BTN2A2Q8WVV5 523 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 DTD2Q96FN9 168 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 CATSPER2Q96P56 530 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 ACOX2Q99424 681 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 PRSS16Q9NQE7 514 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 CACNA2D2Q9NY47 1150 aa14.02□□□□□ -0.16
C9orf3-202ENST00000297979 MBD1Q9UIS9 605 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms