RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 MYOCQ99972 504 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 CPNE5Q9HCH3 593 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 SLC52A3Q9NQ40 469 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 THG1LQ9NWX6 298 aaKnown RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 GALPQ9UBC7 116 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 PCNTO95613 3336 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 FAM234BA2RU67 622 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 MATN3O15232 486 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 DYRK3O43781 588 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 MAFKO60675 156 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 LCKP06239 509 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 PRSS56P0CW18 603 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF37AP17032 561 aaPredicted RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 PFKLP17858 780 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 ADRA1AP35348 466 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 EIF2DP41214 584 aaKnown RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 AIF1P55008 147 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 DSC2Q02487 901 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 TTLL4Q14679 1199 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 LBX2Q6XYB7 198 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 AHSA2Q719I0 299 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 C14orf80Q86SX3 495 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 SVOPQ8N4V2 548 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 ATP6V0D2Q8N8Y2 350 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 OR2T11Q8NH01 316 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 TXNDC15Q96J42 360 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 TMEM209Q96SK2 561 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 KAT8Q9H7Z6 458 aaKnown RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 ZBTB20Q9HC78 741 aaPredicted RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 MOV10Q9HCE1 1003 aaKnown RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 POLR3BQ9NW08 1133 aaPredicted RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 PIN4Q9Y237 131 aaKnown RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 TESMINQ9Y4I5 508 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 POLR3HQ9Y535 204 aaPredicted RBP10.14□□□□□ -0.79
LMX1A-201ENST00000294816 PCDHGA10Q9Y5H3 936 aa10.14□□□□□ -0.79
LMX1A-201ENST00000294816 NPEPPSL1A6NEC2 478 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 CDC7O00311 574 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 KATNA1O75449 491 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 GLP2RO95838 553 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 HPRP00739 348 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 F9P00740 461 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 CYP11A1P05108 521 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 MTHFD2P13995 350 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 FMO4P31512 558 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 GRIK1P39086 918 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 CLPPQ16740 277 aaPredicted RBP10.13□□□□□ -0.79
LMX1A-201ENST00000294816 CCBE1Q6UXH8 406 aaPredicted RBP10.13□□□□□ -0.79
LMX1A-201ENST00000294816 GCNT7Q6ZNI0 430 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 LRRC49Q8IUZ0 686 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 ARHGAP12Q8IWW6 846 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 ADHFE1Q8IWW8 467 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 SIX5Q8N196 739 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 CELF2-AS1Q8N7Q2 184 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 SLC10A4Q96EP9 437 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 ZFYVE19Q96K21 471 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 TSGA13Q96PP4 275 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 SARS2Q9NP81 518 aaKnown RBP10.13□□□□□ -0.79
LMX1A-201ENST00000294816 MYBPHLA2RUH7 354 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 PDZK1P1A8MUH7 402 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 BTN3A1O00481 513 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 ECI2O75521 394 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 G6PDP11413 515 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 GGT1P19440 569 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 IGFBP5P24593 272 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 S100A5P33763 92 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 ERVK-8P63133 956 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 PPP2R2BQ00005 443 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 KCTD2Q14681 263 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 SPATS1Q496A3 300 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 C6orf136Q5SQH8 315 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF691Q5VV52 312 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 PPP2R2DQ66LE6 453 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 ZNF549Q6P9A3 640 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 IL27RAQ6UWB1 636 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 NECAB2Q7Z6G3 386 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 RIOX2Q8IUF8 465 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 PROKR1Q8TCW9 393 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 PHF10Q8WUB8 498 aaKnown RBP10.13□□□□□ -0.79
LMX1A-201ENST00000294816 SMOQ99835 787 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 MRM3Q9HC36 420 aaKnown RBP10.13□□□□□ -0.79
LMX1A-201ENST00000294816 TRMT13Q9NUP7 481 aaKnown RBP10.13□□□□□ -0.79
LMX1A-201ENST00000294816 USE1Q9NZ43 259 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.13□□□□□ -0.79
LMX1A-201ENST00000294816 PCDHB14Q9Y5E9 798 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 GMPPBQ9Y5P6 360 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 BPTFQ12830 3046 aa10.13□□□□□ -0.79
LMX1A-201ENST00000294816 RGS10O43665 173 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 MGEA5O60502 916 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 RECQL5O94762 991 aaPredicted RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 APOA1P02647 267 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 GRK3P35626 688 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 DCTP40126 519 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 MASP1P48740 699 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 LILRA4P59901 499 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 RACK1P63244 317 aaKnown RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 CACNB2Q08289 660 aaPredicted RBP10.12□□□□□ -0.79
LMX1A-201ENST00000294816 PAQR3Q6TCH7 311 aa10.12□□□□□ -0.79
LMX1A-201ENST00000294816 B3GNT8Q7Z7M8 397 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms