RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 JAM2P57087 298 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 CAP1Q01518 475 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 CHIT1Q13231 466 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 CARTPTQ16568 116 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 NDUFA9Q16795 377 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 GFOD2Q3B7J2 385 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 ARL13AQ5H913 290 aaPredicted RBP11.97□□□□□ -0.49
COL8A1-201ENST00000261037 ADGRG6Q86SQ4 1221 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 S100ZQ8WXG8 99 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 MCCC1Q96RQ3 725 aaPredicted RBP11.97□□□□□ -0.49
COL8A1-201ENST00000261037 MIOSQ9NXC5 875 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 MBD2Q9UBB5 411 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 SLC31A1O15431 190 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 PRNPP04156 253 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 HNRNPH3P31942 346 aaKnown RBP11.97□□□□□ -0.49
COL8A1-201ENST00000261037 CHRNA4P43681 627 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 IRF9Q00978 393 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 FBXO42Q6P3S6 717 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 FRRS1Q6ZNA5 592 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 IRGQQ8WZA9 623 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 SLC17A6Q9P2U8 582 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 DMTF1Q9Y222 760 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 PCDHA2Q9Y5H9 948 aa11.97□□□□□ -0.49
COL8A1-201ENST00000261037 MAFBQ9Y5Q3 323 aaPredicted RBP11.97□□□□□ -0.49
COL8A1-201ENST00000261037 RHPN2P1A8MT19 583 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 ARHGEF33A8MVX0 844 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 MATN3O15232 486 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 ATRNO75882 1429 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 CDH12P55289 794 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 BNC1Q01954 994 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 KLF1Q13351 362 aaPredicted RBP11.96□□□□□ -0.49
COL8A1-201ENST00000261037 VARS2Q5ST30 1063 aaKnown RBP11.96□□□□□ -0.49
COL8A1-201ENST00000261037 HGSNATQ68CP4 663 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 VITQ6UXI7 678 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 NPAS4Q8IUM7 802 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 CPNE9Q8IYJ1 553 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 CRYBG2Q8N1P7 616 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 CNPPD1Q9BV87 410 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 CCNB1IP1Q9NPC3 277 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 STXBP5LQ9Y2K9 1186 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 PCDHGB3Q9Y5G1 929 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 TRAFD1O14545 582 aaPredicted RBP11.96□□□□□ -0.49
COL8A1-201ENST00000261037 KCNA5P22460 613 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 PBX1P40424 430 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 RGS8P57771 180 aaPredicted RBP11.96□□□□□ -0.49
COL8A1-201ENST00000261037 ENPEPQ07075 957 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 CA9Q16790 459 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 AHSA2Q719I0 299 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 FAM156AQ8NDB6 213 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 MCFD2Q8NI22 146 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 LCN9Q8WX39 176 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 C1QTNF1Q9BXJ1 281 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 APOBEC3GQ9HC16 384 aaKnown RBP11.96□□□□□ -0.49
COL8A1-201ENST00000261037 NEUROD4Q9HD90 331 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 ABCB8Q9NUT2 735 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 TRIM3O75382 744 aaPredicted RBP11.96□□□□□ -0.49
COL8A1-201ENST00000261037 MTRF1O75570 445 aaKnown RBP11.96□□□□□ -0.49
COL8A1-201ENST00000261037 PDHA2P29803 388 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 DNASE1L1P49184 302 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 MXD1Q05195 221 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 SMARCB1Q12824 385 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 CBX3Q13185 183 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 ACAP2Q15057 778 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 DCST1Q5T197 706 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 TSTD2Q5T7W7 516 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 FSTL4Q6MZW2 842 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 TMPRSS11AQ6ZMR5 421 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 SLC51AQ86UW1 340 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 ECHDC2Q86YB7 292 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 IRF2BP1Q8IU81 584 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 KCT2Q8NC54 265 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 KCNS3Q9BQ31 491 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 NIFKQ9BYG3 293 aaKnown RBP11.96□□□□□ -0.49
COL8A1-201ENST00000261037 CKLFQ9UBR5 152 aa11.96□□□□□ -0.49
COL8A1-201ENST00000261037 SOWAHBA6NEL2 793 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 PER2O15055 1255 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 UGT1A9O60656 530 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 DBIP07108 87 aaKnown RBP11.96□□□□□ -0.5
COL8A1-201ENST00000261037 TCF4P15884 667 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 CD247P20963 164 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 FOXM1Q08050 763 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 FUT2Q10981 343 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 FRMD6Q96NE9 622 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 UGT1A7Q9HAW7 530 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 UGT1A10Q9HAW8 530 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 UGT1A8Q9HAW9 530 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 ZNF536O15090 1300 aa11.96□□□□□ -0.5
COL8A1-201ENST00000261037 LAMP2P13473 410 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 IL12BP29460 328 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 TGFBR2P37173 567 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 IDH3AP50213 366 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CLNKQ7Z7G1 428 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 HID1Q8IV36 788 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 CHST4Q8NCG5 386 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 SNX33Q8WV41 574 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 ARMC5Q96C12 935 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 GAL3ST1Q99999 423 aa11.95□□□□□ -0.5
COL8A1-201ENST00000261037 RBM4BQ9BQ04 359 aaKnown RBP11.95□□□□□ -0.5
COL8A1-201ENST00000261037 RBM4Q9BWF3 364 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms