RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 AQP12BA6NM10 295 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 RSL1D1O76021 490 aaKnown RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 MT-ND1P03886 318 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 CKMP06732 381 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 RPL10P27635 214 aaKnown RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 STK19P49842 368 aaPredicted RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 DEFB103AP81534 67 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 BNIP2Q12982 314 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 NR6A1Q15406 480 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 CDKN3Q16667 212 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 COQ5Q5HYK3 327 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 DGKKQ5KSL6 1271 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 RBM44Q6ZP01 1051 aaKnown RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 GAREM2Q75VX8 874 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 EPHX4Q8IUS5 362 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 AQP12AQ8IXF9 295 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 CBR4Q8N4T8 237 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 KCTD14Q9BQ13 255 aaPredicted RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 C2orf49Q9BVC5 232 aaPredicted RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 TRIM54Q9BYV2 358 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 ACTL8Q9H568 366 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 SUN2Q9UH99 717 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 ST14Q9Y5Y6 855 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 FFAR3O14843 346 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 TEX28O15482 410 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 GPR42O15529 346 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 ZNF821O75541 412 aaPredicted RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 GNRH1P01148 92 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 BMP2P12643 396 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 RPL5P46777 297 aaKnown RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 PPP3CCP48454 512 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 DGKQP52824 942 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 INPP5AQ14642 412 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 PCBP2Q15366 365 aaKnown RBP eCLIP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 CYP51A1Q16850 503 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 RFTN2Q52LD8 501 aaPredicted RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 CWF19L1Q69YN2 538 aaKnown RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 NANOGP8Q6NSW7 305 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 RETSATQ6NUM9 610 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 CERS6Q6ZMG9 384 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 MBOAT1Q6ZNC8 495 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 ADAMTSL2Q86TH1 951 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 RALGPS2Q86X27 583 aaPredicted RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 PDLIM5Q96HC4 596 aaKnown RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 TRIM15Q9C019 465 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 NANOGQ9H9S0 305 aa17.11■□□□□ 0.33
LRFN3-201ENST00000246529 LEF1Q9UJU2 399 aaPredicted RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 POLR3HQ9Y535 204 aaPredicted RBP17.11■□□□□ 0.33
LRFN3-201ENST00000246529 S100BP04271 92 aaPredicted RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 PSMA4P25789 261 aaKnown RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 PLOD1Q02809 727 aaPredicted RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 FOXM1Q08050 763 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 TRAF3Q13114 568 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 SNX20Q7Z614 316 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 CARM1Q86X55 608 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 TCEAL8Q8IYN2 117 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 ADGRG2Q8IZP9 1017 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 RBFAQ8N0V3 343 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 EGFL8Q99944 293 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 OSBPL11Q9BXB4 747 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 MRPS26Q9BYN8 205 aaKnown RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 MRPL17Q9NRX2 175 aaKnown RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 FARSBQ9NSD9 589 aaKnown RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 CRLS1Q9UJA2 301 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 GNPTGQ9UJJ9 305 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 INTS6Q9UL03 887 aaKnown RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 GLYATL1P3A0A0U1RQE8 302 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 FAM234BA2RU67 622 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 NPIPB15A6NHN6 443 aaPredicted RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 LSM1O15116 133 aaKnown RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 LATS1O95835 1130 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 OLFM2O95897 454 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 ACRV1P26436 265 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 ROR2Q01974 943 aaKnown RBP17.1■□□□□ 0.33
LRFN3-201ENST00000246529 SELPLGQ14242 412 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 SLC5A9Q2M3M2 681 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 MYLK3Q32MK0 819 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 RFLNAQ6ZTI6 216 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 HERC2P3Q9BVR0 1158 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 TMCO1Q9UM00 188 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
LRFN3-201ENST00000246529 VILLO15195 856 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 RAD51BO15315 384 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 FKTNO75072 461 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 ITGALP20701 1170 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 TXNL4AP83876 142 aaKnown RBP17.09■□□□□ 0.33
LRFN3-201ENST00000246529 AP5B1Q2VPB7 878 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 NHSL2Q5HYW2 709 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 LRRC73Q5JTD7 316 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 PPP4R4Q6NUP7 873 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 CYP20A1Q6UW02 462 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 MILR1Q7Z6M3 343 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 ZFAND4Q86XD8 727 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 TSPEARQ8WU66 669 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 PPM1MQ96MI6 270 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 AGPAT4Q9NRZ5 378 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 ZIM2Q9NZV7 527 aa17.09■□□□□ 0.33
LRFN3-201ENST00000246529 PTBP2Q9UKA9 531 aaKnown RBP17.09■□□□□ 0.33
LRFN3-201ENST00000246529 SMIM31A0A1B0GVY4 71 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms