RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 RNF208Q9H0X6 261 aa21.61■■□□□ 1.05
RNF39-201ENST00000244360 CLK4Q9HAZ1 481 aaKnown RBP21.61■■□□□ 1.05
RNF39-201ENST00000244360 TNPO3Q9Y5L0 923 aaKnown RBP21.61■■□□□ 1.05
RNF39-201ENST00000244360 A0A1W2PP18 115 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 GIPC1O14908 333 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 TRMUO75648 421 aaKnown RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 TIPRLO75663 272 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 CA5AP35218 305 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 ERVPABLB-1P60509 514 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 ERVK-8P63133 956 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 PRKCQQ04759 706 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 NFATC2Q13469 925 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 METTL3Q86U44 580 aaKnown RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 PDPRQ8NCN5 879 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 LRRC58Q96CX6 371 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 SLC45A3Q96JT2 553 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 RIC8BQ9NVN3 520 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 GNPTGQ9UJJ9 305 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 C9JVG2 144 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 ZNF821O75541 412 aaPredicted RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 OR4F21O95013 312 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 BMP10O95393 424 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 C7P10643 843 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 ITGALP20701 1170 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 SLC6A2P23975 617 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 PSMA4P25789 261 aaKnown RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 GABRR2P28476 465 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 CDK9P50750 372 aaKnown RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 DEFB103AP81534 67 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 CYP4F8P98187 520 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 LMAN2Q12907 356 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 KCTD21Q4G0X4 260 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 PITRM1Q5JRX3 1037 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 PTRHD1Q6GMV3 140 aaKnown RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 TMC8Q8IU68 726 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 DRAXINQ8NBI3 349 aaPredicted RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 TNIP2Q8NFZ5 429 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 TFAP2CQ92754 450 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 GFM2Q969S9 779 aaKnown RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 ACOX2Q99424 681 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 LRRC3Q9BY71 257 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 CAAP1Q9H8G2 361 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 IL26Q9NPH9 171 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 OLAHQ9NV23 265 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 CMTM6Q9NX76 183 aa21.6■■□□□ 1.05
RNF39-201ENST00000244360 GMPR2Q9P2T1 348 aaKnown RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 PTBP2Q9UKA9 531 aaKnown RBP21.6■■□□□ 1.05
RNF39-201ENST00000244360 C1orf232A0A0U1RR37 186 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 DHRS12A0PJE2 317 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 ASPDHA6ND91 283 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 BMP1P13497 986 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 MPPE1Q53F39 396 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 TBCELQ5QJ74 424 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 LYPLAL1Q5VWZ2 237 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 FAM117BQ6P1L5 589 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 LETMD1Q6P1Q0 360 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 BBS7Q8IWZ6 715 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 CHCHD4Q8N4Q1 142 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 OR52B6Q8NGF0 335 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 FIBINQ8TAL6 211 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 FAM81AQ8TBF8 368 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 MRPS31Q92665 395 aaKnown RBP21.59■■□□□ 1.05
RNF39-201ENST00000244360 TRIM54Q9BYV2 358 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 CIPCQ9C0C6 399 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 ABCB8Q9NUT2 735 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 DUS2Q9NX74 493 aaKnown RBP21.59■■□□□ 1.05
RNF39-201ENST00000244360 ZIM2Q9NZV7 527 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 ACTR3BQ9P1U1 418 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 CFAP97Q9P2B7 532 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 CLEC4EQ9ULY5 219 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 CXorf51AA0A1B0GTR3 108 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 EEDO75530 441 aaKnown RBP21.59■■□□□ 1.05
RNF39-201ENST00000244360 FCGR1AP12314 374 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 HNF1BP35680 557 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 FRA10AC1Q70Z53 315 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 ERI1Q8IV48 349 aaKnown RBP21.59■■□□□ 1.05
RNF39-201ENST00000244360 LKAAEAR1Q8TD35 194 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 TEX37Q96LM6 180 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 C9orf16Q9BUW7 83 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 BOCQ9BWV1 1114 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 ASB8Q9H765 288 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 ATP13A3Q9H7F0 1226 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 IL1RL2Q9HB29 575 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 SAGE1Q9NXZ1 904 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 KIAA1522Q9P206 1035 aaPredicted RBP21.59■■□□□ 1.05
RNF39-201ENST00000244360 PCDHA9Q9Y5H5 950 aa21.59■■□□□ 1.05
RNF39-201ENST00000244360 H3BSA7 217 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 IGSF6O95976 241 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 GLUD1P00367 558 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 BPIP17213 487 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 ACRV1P26436 265 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 SLC5A2P31639 672 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 APLP1P51693 650 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 KCNK10P57789 538 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 CREMQ03060 361 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 PLEKHG6Q3KR16 790 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 C6orf136Q5SQH8 315 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 CBARPQ8N350 705 aaPredicted RBP21.58■■□□□ 1.05
RNF39-201ENST00000244360 CDYL2Q8N8U2 506 aa21.58■■□□□ 1.05
RNF39-201ENST00000244360 VOPP1Q96AW1 172 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms