RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ZNF624Q9P2J8 865 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-201ENST00000223398 SH3GLB1Q9Y371 365 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-201ENST00000223398 LAMP2P13473 410 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 ASMTP46597 345 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 HEATR4Q86WZ0 1026 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 LIX1Q8N485 282 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 TERB1Q8NA31 727 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 GALNT8Q9NY28 637 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 HEBP2Q9Y5Z4 205 aa18.23■□□□□ 0.51
CLIP2-201ENST00000223398 TSC22D2O75157 780 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 C8GP07360 202 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 CPN2P22792 545 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 TAS2R39P59534 338 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 LCP2Q13094 533 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 TRMT10BQ6PF06 316 aaKnown RBP18.22■□□□□ 0.51
CLIP2-201ENST00000223398 ZNF598Q86UK7 904 aaKnown RBP18.22■□□□□ 0.51
CLIP2-201ENST00000223398 SMPDL3BQ92485 455 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 IRF7Q92985 503 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 FAXDC2Q96IV6 333 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 MRPS7Q9Y2R9 242 aaKnown RBP18.22■□□□□ 0.51
CLIP2-201ENST00000223398 NR2E1Q9Y466 385 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 EDDM13A0A1B0GTR0 161 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 TRAFD1O14545 582 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-201ENST00000223398 UNC5CO95185 931 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 LCA5LO95447 670 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 NCBP2-AS2Q69YL0 99 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 TXNRD3NBQ6F5E7 133 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 TMEM139Q8IV31 216 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 RASGRP3Q8IV61 690 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 ZNF540Q8NDQ6 660 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 COPS7AQ9UBW8 275 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 A8MUA0 341 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 NIPSNAP2O75323 286 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 CCR3P51677 355 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 RPTNQ6XPR3 784 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 HIPK1Q86Z02 1210 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 OR10H5Q8NGA6 315 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 NTAN1Q96AB6 310 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 C16orf70Q9BSU1 422 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 SLC7A4O43246 635 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 CLDN7O95471 211 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 GHRHRQ02643 423 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 ZNF776Q68DI1 518 aaPredicted RBP18.22■□□□□ 0.51
CLIP2-201ENST00000223398 ZNF730Q6ZMV8 503 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 KIAA0408Q6ZU52 694 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 PCYT2Q99447 389 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 KLHL25Q9H0H3 589 aa18.22■□□□□ 0.51
CLIP2-201ENST00000223398 CENPXA8MT69 81 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 B3GALT2O43825 422 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 EDF1O60869 148 aaKnown RBP18.21■□□□□ 0.51
CLIP2-201ENST00000223398 ENTPD5O75356 428 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 CLCNKAP51800 687 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 CHRNA6Q15825 494 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 NET1Q7Z628 596 aaPredicted RBP18.21■□□□□ 0.51
CLIP2-201ENST00000223398 TMEM110Q86TL2 294 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 Q8N9G6 341 aaPredicted RBP18.21■□□□□ 0.51
CLIP2-201ENST00000223398 PHC3Q8NDX5 983 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 C8orf48Q96LL4 319 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 CRISPLD1Q9H336 500 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 NDUFA13Q9P0J0 144 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 IGSF9Q9P2J2 1179 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 C3orf18Q9UK00 162 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 M0R2N6 131 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 KCNA5P22460 613 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 CCNHP51946 323 aaPredicted RBP18.21■□□□□ 0.51
CLIP2-201ENST00000223398 TRAF3Q13114 568 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 ZSWIM7Q19AV6 140 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 TMEM27Q9HBJ8 222 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 ZNF446Q9NWS9 450 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 H0YC42 278 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 STX11O75558 287 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 KRT36O76013 467 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 TNFP01375 233 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 IL12BP29460 328 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 ST13P50502 369 aaKnown RBP18.21■□□□□ 0.51
CLIP2-201ENST00000223398 LSM3P62310 102 aaKnown RBP18.21■□□□□ 0.51
CLIP2-201ENST00000223398 LARS2Q15031 903 aaKnown RBP18.21■□□□□ 0.51
CLIP2-201ENST00000223398 MYLK3Q32MK0 819 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 TMEM145Q8NBT3 493 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 KCTD13Q8WZ19 329 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 IQCMA0A1B0GVH7 501 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 DRD4P21917 467 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 GRIA1P42261 906 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 ENPEPQ07075 957 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 SIRPB2Q5JXA9 342 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 MPP5Q8N3R9 675 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 KAT2AQ92830 837 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 TCF12Q99081 682 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 TMEM98Q9Y2Y6 226 aa18.21■□□□□ 0.51
CLIP2-201ENST00000223398 KCNJ2P63252 427 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 POU5F1Q01860 360 aaKnown RBP18.2■□□□□ 0.5
CLIP2-201ENST00000223398 PPIDQ08752 370 aaKnown RBP18.2■□□□□ 0.5
CLIP2-201ENST00000223398 RTL4Q6ZR62 310 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 LMX1AQ8TE12 382 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 FCRL5Q96RD9 977 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 TTYH3Q9C0H2 523 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 ALOX12P18054 663 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 GKP32189 559 aa18.2■□□□□ 0.5
CLIP2-201ENST00000223398 FSTL5Q8N475 847 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms