RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 R3HCC1LQ7Z5L2 792 aaKnown RBP13.47□□□□□ -0.25
GABPB1-201ENST00000220429 AADATQ8N5Z0 425 aa13.47□□□□□ -0.25
GABPB1-201ENST00000220429 SMOQ99835 787 aa13.47□□□□□ -0.25
GABPB1-201ENST00000220429 EBNA1BP2Q99848 306 aaKnown RBP13.47□□□□□ -0.25
GABPB1-201ENST00000220429 ULBP1Q9BZM6 244 aa13.47□□□□□ -0.25
GABPB1-201ENST00000220429 UCK2Q9BZX2 261 aa13.47□□□□□ -0.25
GABPB1-201ENST00000220429 ROGDIQ9GZN7 287 aa13.47□□□□□ -0.25
GABPB1-201ENST00000220429 SLIRPQ9GZT3 109 aaKnown RBP13.47□□□□□ -0.25
GABPB1-201ENST00000220429 AGPAT4Q9NRZ5 378 aa13.47□□□□□ -0.25
GABPB1-201ENST00000220429 FAM8A1Q9UBU6 413 aa13.47□□□□□ -0.25
GABPB1-201ENST00000220429 A0A0A0MRY4 1105 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 MYBPHLA2RUH7 354 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 TCAF2A6NFQ2 919 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 HACD1B0YJ81 288 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 M0QZ92 97 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 NEMP1O14524 444 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 TRIM24O15164 1050 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 SNAP29O95721 258 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 OLFM2O95897 454 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 CRHBPP24387 322 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 GARSP41250 739 aaKnown RBP13.46□□□□□ -0.25
GABPB1-201ENST00000220429 PTPN5P54829 565 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 VBP1P61758 197 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 GPRIN1Q7Z2K8 1008 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 NLGN4XQ8N0W4 816 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 NAT16Q8N8M0 369 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 ZFAND1Q8TCF1 268 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 FBXW5Q969U6 566 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 SPATA13Q96N96 652 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 MUS81Q96NY9 551 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 UNC93B1Q9H1C4 597 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 TOR3AQ9H497 397 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 TM9SF3Q9HD45 589 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 B3GNT2Q9NY97 397 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.46□□□□□ -0.25
GABPB1-201ENST00000220429 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 AURKCQ9UQB9 309 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 SHROOM3Q8TF72 1996 aa13.46□□□□□ -0.25
GABPB1-201ENST00000220429 PRORSD1PA6NEY8 169 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 INMTO95050 263 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 CHRNA1P02708 482 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 ALBP02768 609 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 THP07101 528 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 CLEC2LP0C7M8 214 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 CSH1P0DML2 217 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 CSH2P0DML3 217 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 CYP2A6P11509 494 aaPredicted RBP13.46□□□□□ -0.26
GABPB1-201ENST00000220429 FASP25445 335 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 UGT2B10P36537 528 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 IL12RB1P42701 662 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.26
GABPB1-201ENST00000220429 RBM48Q5RL73 367 aaKnown RBP13.46□□□□□ -0.26
GABPB1-201ENST00000220429 CTU1Q7Z7A3 348 aaKnown RBP13.46□□□□□ -0.26
GABPB1-201ENST00000220429 FAM35AQ86V20 835 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 DHFR2Q86XF0 187 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 TP53INP2Q8IXH6 220 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 GLB1L3Q8NCI6 653 aaPredicted RBP13.46□□□□□ -0.26
GABPB1-201ENST00000220429 ZMIZ2Q8NF64 920 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF578Q96N58 590 aaPredicted RBP13.46□□□□□ -0.26
GABPB1-201ENST00000220429 PHOX2BQ99453 314 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 PAAF1Q9BRP4 392 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 ANKHQ9HCJ1 492 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 ZBTB26Q9HCK0 441 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 SNX15Q9NRS6 342 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 CCM2LQ9NUG4 571 aaPredicted RBP13.46□□□□□ -0.26
GABPB1-201ENST00000220429 TAS2R9Q9NYW1 312 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 COMMD10Q9Y6G5 202 aa13.46□□□□□ -0.26
GABPB1-201ENST00000220429 TDRD15B5MCY1 1934 aaKnown RBP13.46□□□□□ -0.26
GABPB1-201ENST00000220429 HMX3A6NHT5 357 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF98A6NK75 572 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 YJEFN3A6XGL0 299 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 I3L521 148 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 HSPA4LO95757 839 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 ALOX12P18054 663 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 ALAS2P22557 587 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 RPS9P46781 194 aaKnown RBP13.45□□□□□ -0.26
GABPB1-201ENST00000220429 GALEQ14376 348 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 ZMYND11Q15326 602 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 PLEKHG6Q3KR16 790 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 PARP15Q460N3 678 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 DDIASQ8IXT1 998 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 OR4M2Q8NGB6 313 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 OR4M1Q8NGD0 313 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 MCFD2Q8NI22 146 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 P2RY11Q96G91 374 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-201ENST00000220429 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 CEP41Q9BYV8 373 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 ZFP14Q9HCL3 533 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 GRIP1Q9Y3R0 1128 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 FAM72CH0Y354 149 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 I6L893 689 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-201ENST00000220429 SSX4O60224 188 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 GLRA3O75311 464 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 PGK1P00558 417 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 LHX1P48742 406 aa13.45□□□□□ -0.26
GABPB1-201ENST00000220429 SCNN1GP51170 649 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms