RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 BTAF1O14981 1849 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 USP54Q70EL1 1684 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 A0A1B0GW55 424 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 LRRC14BA6NHZ5 514 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 CHURC1-FNTBB4DL54 471 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 HDAC3O15379 428 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DNAJA2O60884 412 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 SLC22A3O75751 556 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 KRT33AO76009 404 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 AP2A2O94973 939 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 PIRTP0C851 137 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DUX4L2P0CJ85 424 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DUX4L3P0CJ86 424 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DUX4L4P0CJ87 422 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DUX4L5P0CJ88 424 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DUX4L6P0CJ89 424 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DUX4L7P0CJ90 424 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DPP6P42658 865 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 CTSOP43234 321 aaPredicted RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 MRPS35P82673 323 aaKnown RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 SRSF11Q05519 484 aaKnown RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 LGALS3BPQ08380 585 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 PAFAH1B3Q15102 231 aaKnown RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 ALFQ53S48 1182 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 INO80DQ53TQ3 878 aaPredicted RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 FAM92BQ6ZTR7 304 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 BEND5Q7L4P6 421 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 APTXQ7Z2E3 356 aaKnown RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 GRASPQ7Z6J2 395 aaPredicted RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 AMZ2Q86W34 360 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 CIR1Q86X95 450 aaPredicted RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 FAM20CQ8IXL6 584 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 ZNF786Q8N393 782 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DCAF4L2Q8NA75 395 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 SMG8Q8ND04 991 aaKnown RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 CPT1BQ92523 772 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 PMM1Q92871 262 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 COL26A1Q96A83 441 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 RAD51AP1Q96B01 352 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 SLC38A2Q96QD8 506 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 TEFMQ96QE5 360 aaKnown RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 MYOCQ99972 504 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 P2RY13Q9BPV8 354 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 FAM83CQ9BQN1 747 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 RACGAP1Q9H0H5 632 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 TFB2MQ9H5Q4 396 aaKnown RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 LRTM1Q9HBL6 345 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 SPAG4Q9NPE6 437 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 C8orf4Q9NR00 106 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 USE1Q9NZ43 259 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 GMPR2Q9P2T1 348 aaKnown RBP4.2□□□□□ -1.74
CFTR-201ENST00000003084 DUX4Q9UBX2 424 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 CD84Q9UIB8 345 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 DUSP13Q9UII6 198 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 GMEB2Q9UKD1 530 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 GTF2A1LQ9UNN4 478 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 HS3ST4Q9Y661 456 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 MAST2Q6P0Q8 1798 aa4.2□□□□□ -1.74
CFTR-201ENST00000003084 KLHL33A6NCF5 533 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 NEMP2A6NFY4 417 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 FFAR3O14843 346 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 GPR42O15529 346 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 PI15O43692 258 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 NPHS1O60500 1241 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 BPGMP07738 259 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 ALPIP09923 528 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 MYL12AP19105 171 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 PRDX6P30041 224 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 IGFALSP35858 605 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 RING1Q06587 406 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 ARTNQ5T4W7 220 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 ATXN7L2Q5T6C5 722 aaPredicted RBP4.19□□□□□ -1.74
CFTR-201ENST00000003084 SLC39A4Q6P5W5 647 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 RABEPKQ7Z6M1 372 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 TDRPQ86YL5 185 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 NRSN1Q8IZ57 195 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 ADGRG2Q8IZP9 1017 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 CDYL2Q8N8U2 506 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 OR2AP1Q8NGE2 309 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 MOSPD2Q8NHP6 518 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 SCAMP5Q8TAC9 235 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 HMGB4Q8WW32 186 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 PTCD3Q96EY7 689 aaKnown RBP4.19□□□□□ -1.74
CFTR-201ENST00000003084 ZNF641Q96N77 438 aaPredicted RBP4.19□□□□□ -1.74
CFTR-201ENST00000003084 GPR21Q99679 349 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 OSBPL10Q9BXB5 764 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 SLC29A3Q9BZD2 475 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 KCNN2Q9H2S1 579 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 IKZF4Q9H2S9 585 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 NOD2Q9HC29 1040 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 COPS7AQ9UBW8 275 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 TRAF6Q9Y4K3 522 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 IRS2Q9Y4H2 1338 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 DNAJC25-GNG10A0A024R161 153 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 H0Y858 1186 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 ATP5A1P25705 553 aaKnown RBP4.19□□□□□ -1.74
CFTR-201ENST00000003084 UGT2B15P54855 530 aa4.19□□□□□ -1.74
CFTR-201ENST00000003084 MANFP55145 182 aaKnown RBP4.19□□□□□ -1.74
CFTR-201ENST00000003084 NRG1Q02297 640 aaPredicted RBP4.19□□□□□ -1.74
CFTR-201ENST00000003084 GBE1Q04446 702 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms