RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 METRNLQ641Q3 311 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 LDB1Q86U70 411 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-231ENST00000640499 ZNF761Q86XN6 746 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-231ENST00000640499 OR2L2Q8NH16 312 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 XAB2Q9HCS7 855 aaKnown RBP26.21■■□□□ 1.79
VEGFA-231ENST00000640499 ATXN7L1Q9ULK2 861 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-231ENST00000640499 PCDHB1Q9Y5F3 818 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 PIKFYVEQ9Y2I7 2098 aa26.21■■□□□ 1.79
VEGFA-231ENST00000640499 SDR42E2A6NKP2 422 aa26.2■■□□□ 1.78
VEGFA-231ENST00000640499 RHPN2P1A8MT19 583 aa26.2■■□□□ 1.78
VEGFA-231ENST00000640499 IDSP22304 550 aa26.2■■□□□ 1.78
VEGFA-231ENST00000640499 ARCN1P48444 511 aaKnown RBP26.2■■□□□ 1.78
VEGFA-231ENST00000640499 ITIH4Q14624 930 aa26.2■■□□□ 1.78
VEGFA-231ENST00000640499 IZUMO3Q5VZ72 239 aa26.2■■□□□ 1.78
VEGFA-231ENST00000640499 SYDE1Q6ZW31 735 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-231ENST00000640499 RUNDC3BQ96NL0 473 aa26.2■■□□□ 1.78
VEGFA-231ENST00000640499 SARS2Q9NP81 518 aaKnown RBP26.2■■□□□ 1.78
VEGFA-231ENST00000640499 CPNE7Q9UBL6 633 aa26.2■■□□□ 1.78
VEGFA-231ENST00000640499 WDFY3Q8IZQ1 3526 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 KIR2DS5A0A0G2JLQ3 304 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 A0A0G2JNG1 304 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 A0A1W2PNU3 283 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-231ENST00000640499 TRABD2BA6NFA1 517 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 OR5K4A6NMS3 321 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 KIR2DS3K7RE56 304 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 CSO75390 466 aaKnown RBP26.19■■□□□ 1.78
VEGFA-231ENST00000640499 RALBP11234 206 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 XRCC1P18887 633 aaPredicted RBP26.19■■□□□ 1.78
VEGFA-231ENST00000640499 CD1CP29017 333 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 PRAMEP78395 509 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 CFHR1Q03591 330 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 C2orf54Q08AI8 447 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 KIR2DS5Q14953 304 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 ISXQ2M1V0 245 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 PACS1Q6VY07 963 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 B3GNT8Q7Z7M8 397 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 ENTPD2Q9Y5L3 495 aa26.19■■□□□ 1.78
VEGFA-231ENST00000640499 OR52A4PA6NMU1 304 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 PDZK1P1A8MUH7 402 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 CFAP99D6REC4 459 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 TCEA3O75764 348 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 ALDH4A1P30038 563 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 GPR3P46089 330 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 HHEXQ03014 270 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 MSS51Q4VC12 460 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 NKAIN2Q5VXU1 208 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 RBM44Q6ZP01 1051 aaKnown RBP26.18■■□□□ 1.78
VEGFA-231ENST00000640499 TMEM135Q86UB9 458 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 PWWP2AQ96N64 755 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 CNTNAP3BQ96NU0 1288 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 CNTNAP3Q9BZ76 1288 aa26.18■■□□□ 1.78
VEGFA-231ENST00000640499 ACACBO00763 2458 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 TPRP12270 2363 aaKnown RBP26.17■■□□□ 1.78
VEGFA-231ENST00000640499 IGHV1OR21-1A0A087WYE8 117 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 D6RAR5 112 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 CD3EAPO15446 510 aaKnown RBP26.17■■□□□ 1.78
VEGFA-231ENST00000640499 VAPBO95292 243 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 VCLP18206 1134 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 DHX34Q14147 1143 aaKnown RBP26.17■■□□□ 1.78
VEGFA-231ENST00000640499 SPIDRQ14159 915 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 ANKRD20A4Q4UJ75 823 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 FASTKD1Q53R41 847 aaKnown RBP26.17■■□□□ 1.78
VEGFA-231ENST00000640499 ARMC3Q5W041 872 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 ZNF574Q6ZN55 896 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-231ENST00000640499 ZNF572Q7Z3I7 529 aaPredicted RBP26.17■■□□□ 1.78
VEGFA-231ENST00000640499 SLC9B2Q86UD5 537 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 HOOK3Q86VS8 718 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 WDR48Q8TAF3 677 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 DEPDC7Q96QD5 511 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 GFM1Q96RP9 751 aaKnown RBP26.17■■□□□ 1.78
VEGFA-231ENST00000640499 CCM2Q9BSQ5 444 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 SYNDIG1Q9H7V2 258 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 CATSPERZQ9NTU4 200 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 PSMD13Q9UNM6 376 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 KIF26BQ2KJY2 2108 aa26.17■■□□□ 1.78
VEGFA-231ENST00000640499 ZCWPW2A0A1B0GU75 182 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 FAM237BA0A1B0GVD1 139 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 GOLGA8KD6RF30 607 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 GOLGA8TH3BQL2 631 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 BANF1O75531 89 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 AP2A2O94973 939 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 SLC2A4P14672 509 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 NSG1P42857 185 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 AMZ1Q400G9 498 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 LYPLAL1Q5VWZ2 237 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 KIAA0930Q6ICG6 404 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-231ENST00000640499 HIBCHQ6NVY1 386 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-231ENST00000640499 UNQ6494/PRO21346Q6UXR6 183 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 CERS6Q6ZMG9 384 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 USP53Q70EK8 1073 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 PCGF5Q86SE9 256 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 CFAP206Q8IYR0 622 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 SPDYE1Q8NFV5 336 aaPredicted RBP26.16■■□□□ 1.78
VEGFA-231ENST00000640499 RDH14Q9HBH5 336 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 IL1RAPL1Q9NZN1 696 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 FAM8A1Q9UBU6 413 aa26.16■■□□□ 1.78
VEGFA-231ENST00000640499 FREM2Q5SZK8 3169 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 C17orf113A0A1B0GUU1 675 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 MAGEB16A2A368 324 aa26.15■■□□□ 1.78
VEGFA-231ENST00000640499 HOXB3P14651 431 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms