RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TMEM126BQ8IUX1 230 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 CPNE9Q8IYJ1 553 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 FAM156AQ8NDB6 213 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 ZNF483Q8TF39 744 aaPredicted RBP14.9□□□□□ -0.02
TRIM3-215ENST00000639856 ISG20Q96AZ6 181 aaKnown RBP14.9□□□□□ -0.02
TRIM3-215ENST00000639856 TUBGCP3Q96CW5 907 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 SFXN1Q9H9B4 322 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 EPS15L1Q9UBC2 864 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 POLG2Q9UHN1 485 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 PCTPQ9UKL6 214 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 NPIPB15A6NHN6 443 aaPredicted RBP14.9□□□□□ -0.02
TRIM3-215ENST00000639856 VPS4BO75351 444 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 MLYCDO95822 493 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 LBPP18428 481 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 CA5AP35218 305 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 AGTR2P50052 363 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 CLCN7P51798 805 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 HK3P52790 923 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 RPL26P61254 145 aaKnown RBP14.9□□□□□ -0.02
TRIM3-215ENST00000639856 MESP2Q0VG99 397 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 GRB7Q14451 532 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 CDKN3Q16667 212 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 GRAMD1BQ3KR37 738 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 CARD16Q5EG05 197 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 LRRC73Q5JTD7 316 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 FAM151BQ6UXP7 276 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 FGF13Q92913 245 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRIM3-215ENST00000639856 CCDC97Q96F63 343 aaPredicted RBP14.9□□□□□ -0.02
TRIM3-215ENST00000639856 ZFYVE1Q9HBF4 777 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 GIMAP2Q9UG22 337 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 CROTQ9UKG9 612 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 PCDHB1Q9Y5F3 818 aa14.9□□□□□ -0.02
TRIM3-215ENST00000639856 ZNF106Q9H2Y7 1883 aaKnown RBP14.9□□□□□ -0.02
TRIM3-215ENST00000639856 CXorf51AA0A1B0GTR3 108 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 CAPN8A6NHC0 703 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 BBIP1A8MTZ0 92 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 GAPDHSO14556 408 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 PRMT5O14744 637 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 SLC9A3R1O14745 358 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 CRCPO75575 148 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 ESRRBO95718 433 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 UGT2B4P06133 528 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 LINC00032P0C843 101 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 UQCRBP14927 111 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 ATXN3P54252 364 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 ADGRE1Q14246 886 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 GET4Q7L5D6 327 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 KIAA0907Q7Z7F0 614 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 AHI1Q8N157 1196 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 MIER2Q8N344 545 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 PCYOX1LQ8NBM8 494 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 GRIN3AQ8TCU5 1115 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 NAT14Q8WUY8 206 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 OSCP1Q8WVF1 389 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 ROPN1LQ96C74 230 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 SPDL1Q96EA4 605 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 PDLIM5Q96HC4 596 aaKnown RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 LRGUKQ96M69 825 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 KLHL32Q96NJ5 620 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 ASB16Q96NS5 453 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 MTG2Q9H4K7 406 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 SARS2Q9NP81 518 aaKnown RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 RIMS3Q9UJD0 308 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 ERVW-1Q9UQF0 538 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 BTRCQ9Y297 605 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 DHRS7Q9Y394 339 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 UNC80Q8N2C7 3258 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 PRSS51A0A1B0GVH4 220 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 PRORSD1PA6NEY8 169 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 OTOL1A6NHN0 477 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 IQCF5A8MTL0 148 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 TTC34A8MYJ7 566 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 SNX2O60749 519 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 MATN4O95460 622 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 ADH5P11766 374 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 HGFP14210 728 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 POLR2EP19388 210 aaKnown RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 FSHRP23945 695 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 IRX1P78414 480 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 SYVN1Q86TM6 617 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 SPATA24Q86W54 205 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 OR2A12Q8NGT7 310 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 ECHDC3Q96DC8 303 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 MRGPRX3Q96LB0 322 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 C19orf43Q9BQ61 176 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 HGH1Q9BTY7 390 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 NUSAP1Q9BXS6 441 aaKnown RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 CEP44Q9C0F1 390 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 SUV39H2Q9H5I1 410 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 SDR39U1Q9NRG7 319 aaPredicted RBP14.89□□□□□ -0.03
TRIM3-215ENST00000639856 CD274Q9NZQ7 290 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 TMEM181Q9P2C4 612 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 CD300AQ9UGN4 299 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 TIMM22Q9Y584 194 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 XIRP2A4UGR9 3374 aa14.89□□□□□ -0.03
TRIM3-215ENST00000639856 GOLGA8CPA6NN73 597 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 E2F3O00716 465 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 LINC01565O15544 149 aa14.88□□□□□ -0.03
TRIM3-215ENST00000639856 LYNP07948 512 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms