RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 MMP12P39900 470 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 EIF2DP41214 584 aaKnown RBP14.04□□□□□ -0.16
LIMS4-204ENST00000632897 CPA2P48052 419 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 HK3P52790 923 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 RUNX3Q13761 415 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 COL19A1Q14993 1142 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 TGFBIQ15582 683 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 LRRC73Q5JTD7 316 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 KANK2Q63ZY3 851 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 SBSNQ6UWP8 590 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 RFLNAQ6ZTI6 216 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 CHSY3Q70JA7 882 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 HSD11B1LQ7Z5J1 315 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 YAF2Q8IY57 180 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 PELI3Q8N2H9 469 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 CLDN19Q8N6F1 224 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 TERB1Q8NA31 727 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 PDPRQ8NCN5 879 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 MAGEC3Q8TD91 643 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 AGAP11Q8TF27 550 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 DCUN1D1Q96GG9 259 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 ZSCAN5AQ9BUG6 496 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 APOL5Q9BWW9 433 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 SPATA16Q9BXB7 569 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 FAM126AQ9BYI3 521 aaPredicted RBP14.04□□□□□ -0.16
LIMS4-204ENST00000632897 MTG2Q9H4K7 406 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 TNFRSF12AQ9NP84 129 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 MID1IP1Q9NPA3 183 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 PCTPQ9UKL6 214 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 OARD1Q9Y530 152 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 PLXNA2O75051 1894 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 BDP1A6H8Y1 2624 aa14.04□□□□□ -0.16
LIMS4-204ENST00000632897 COL4A3Q01955 1670 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 OTOL1A6NHN0 477 aaPredicted RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 H0Y858 1186 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 QSOX1O00391 747 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 SKAP2O75563 359 aaPredicted RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 THRAP10827 490 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 COX4I1P13073 169 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 ITGB6P18564 788 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 PIK3R1P27986 724 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 PGM1P36871 562 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 RAP1GDS1P52306 607 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 CDH13P55290 713 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 SH3BP2P78314 561 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 IRX1P78414 480 aaPredicted RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 MXRA7P84157 204 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 B4GALNT1Q00973 533 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 ELAVL3Q14576 367 aaKnown RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 PCBP2Q15366 365 aaKnown RBP eCLIP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 ZRSR2Q15696 482 aaKnown RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 ZNF284Q2VY69 593 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 UGT3A2Q3SY77 523 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 ACSBG2Q5FVE4 666 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 ATAT1Q5SQI0 421 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 C9orf64Q5T6V5 341 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 HENMT1Q5T8I9 393 aaKnown RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 METTL2BQ6P1Q9 378 aaKnown RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 PARS2Q7L3T8 475 aaKnown RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 TECPR1Q7Z6L1 1165 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 OR56A4Q8NGH8 313 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 TRPC4APQ8TEL6 797 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 ELSPBP1Q96BH3 223 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 C19orf60Q96EN9 201 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 PPP1R16AQ96I34 528 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 PPP1R36Q96LQ0 422 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 VPS35Q96QK1 796 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 RTKNQ9BST9 563 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 NUSAP1Q9BXS6 441 aaKnown RBP14.03□□□□□ -0.16
LIMS4-204ENST00000632897 TMEM245Q9H330 911 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 BAIAP2L1Q9UHR4 511 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 PPM1HQ9ULR3 514 aa14.03□□□□□ -0.16
LIMS4-204ENST00000632897 LRRC14BA6NHZ5 514 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 KPNA3O00505 521 aaPredicted RBP14.02□□□□□ -0.16
LIMS4-204ENST00000632897 KPNA5O15131 536 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 VPS4BO75351 444 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 ATP1B2P14415 290 aaPredicted RBP14.02□□□□□ -0.16
LIMS4-204ENST00000632897 CPOXP36551 454 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 OPRD1P41143 372 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 ATP4BP51164 291 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 PKNOX1P55347 436 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 ELP6Q0PNE2 266 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 SQLEQ14534 574 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 ZNF234Q14588 700 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 PPP1R3AQ16821 1122 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 CDKL4Q5MAI5 379 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 LIPIQ6XZB0 460 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 DSG4Q86SJ6 1040 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 CHCHD4Q8N4Q1 142 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 DDHD1Q8NEL9 900 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 RP9Q8TA86 221 aaKnown RBP14.02□□□□□ -0.16
LIMS4-204ENST00000632897 NSUN5Q96P11 429 aaKnown RBP14.02□□□□□ -0.16
LIMS4-204ENST00000632897 CATSPER2Q96P56 530 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 ZNF382Q96SR6 550 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 RDH14Q9HBH5 336 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 ZBTB26Q9HCK0 441 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 PFDN4Q9NQP4 134 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 TMPRSS11EQ9UL52 423 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 FIS1Q9Y3D6 152 aa14.02□□□□□ -0.16
LIMS4-204ENST00000632897 REV3LO60673 3130 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms