RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TUBB6Q9BUF5 446 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 ARL8BQ9NVJ2 186 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 ANKRD12Q6UB98 2062 aa21.14■□□□□ 0.97
SPAST-204ENST00000621856 CKAP5Q14008 2032 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 H0YHG0 523 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 RAD51BO15315 384 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 AP2A2O94973 939 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 CCR7P32248 378 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 CTHP32929 405 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 KIR2DL1P43626 348 aaPredicted RBP21.13■□□□□ 0.97
SPAST-204ENST00000621856 KRT72Q14CN4 511 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 TGFBIQ15582 683 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 CST6Q15828 149 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 KHDC1Q4VXA5 237 aaKnown RBP21.13■□□□□ 0.97
SPAST-204ENST00000621856 ZNF648Q5T619 568 aaPredicted RBP21.13■□□□□ 0.97
SPAST-204ENST00000621856 FAM91A1Q658Y4 838 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 ACAD11Q709F0 780 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 ZNF765Q7L2R6 523 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 KIRREL3Q8IZU9 778 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 KLHL29Q96CT2 875 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 GAS2L1Q99501 681 aaPredicted RBP21.13■□□□□ 0.97
SPAST-204ENST00000621856 RSPH9Q9H1X1 276 aaPredicted RBP21.13■□□□□ 0.97
SPAST-204ENST00000621856 CDYLQ9Y232 598 aa21.13■□□□□ 0.97
SPAST-204ENST00000621856 GOLGA8QA0A0J9YX86 632 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 GOLGA8OA6NCC3 632 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 TRPC5OSA6NMA1 111 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 C2CD4DB7Z1M9 353 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 GOLGA8NF8WBI6 632 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 INPP4BO15327 924 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 MID1O15344 667 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 T-ENOLP0DO92 83 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 SATB1Q01826 763 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 FBXO48Q5FWF7 155 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 SBSNQ6UWP8 590 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 PHYKPLQ8IUZ5 450 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 EZH1Q92800 747 aaPredicted RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 NSL1Q96IY1 281 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 FAM161BQ96MY7 647 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 WDR55Q9H6Y2 383 aaPredicted RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 TCF7L2Q9NQB0 619 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 MBD1Q9UIS9 605 aaPredicted RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 TRIM33Q9UPN9 1127 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 FADS3Q9Y5Q0 445 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 BRWD1Q9NSI6 2320 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 UBFD1O14562 309 aaKnown RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 ADH1BP00325 375 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 FTH1P02794 183 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 RPS17P08708 135 aaKnown RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 ENO3P13929 434 aaPredicted RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 NCF2P19878 526 aaPredicted RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 AOAHP28039 575 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 AGTR2P50052 363 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 NAA20P61599 178 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 UBAP2LQ14157 1087 aaKnown RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 PIP5KL1Q5T9C9 394 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 SDE2Q6IQ49 451 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 TRPC4APQ8TEL6 797 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 NSUN5Q96P11 429 aaKnown RBP21.12■□□□□ 0.97
SPAST-204ENST00000621856 OR52B2Q96RD2 323 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 TNFRSF12AQ9NP84 129 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 SORCS3Q9UPU3 1222 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 OARD1Q9Y530 152 aa21.12■□□□□ 0.97
SPAST-204ENST00000621856 E9PBE3 544 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 QSOX1O00391 747 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 KPNA5O15131 536 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 TNRC18O15417 2968 aaPredicted RBP21.11■□□□□ 0.97
SPAST-204ENST00000621856 KLHL41O60662 606 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 SKAP2O75563 359 aaPredicted RBP21.11■□□□□ 0.97
SPAST-204ENST00000621856 GPR1P46091 355 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 CLCQ05315 142 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 HSPA14Q0VDF9 509 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 BOP1Q14137 746 aaKnown RBP21.11■□□□□ 0.97
SPAST-204ENST00000621856 PON2Q15165 354 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 TBCCQ15814 346 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 C2orf27AQ580R0 203 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 RAET1GQ6H3X3 334 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 CYHR1Q6ZMK1 362 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 MID1IP1Q9NPA3 183 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 ADAMTS6Q9UKP5 1117 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 TRAF6Q9Y4K3 522 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 PIAS3Q9Y6X2 628 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 ATG2BQ96BY7 2078 aa21.11■□□□□ 0.97
SPAST-204ENST00000621856 OR2AG2A6NM03 316 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 EIF3FO00303 357 aaPredicted RBP21.1■□□□□ 0.97
SPAST-204ENST00000621856 HNRNPCL1O60812 293 aaKnown RBP21.1■□□□□ 0.97
SPAST-204ENST00000621856 EGFP01133 1207 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 C5AR1P21730 350 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 EPHA3P29320 983 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 NTSR1P30989 418 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 DRD3P35462 400 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 RASSF2P50749 326 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 STARD3Q14849 445 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 PLEKHS1Q5SXH7 462 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 ZNF776Q68DI1 518 aaPredicted RBP21.1■□□□□ 0.97
SPAST-204ENST00000621856 NXNQ6DKJ4 435 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.1■□□□□ 0.97
SPAST-204ENST00000621856 HDDC3Q8N4P3 179 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 AADATQ8N5Z0 425 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 ELMO1Q92556 727 aa21.1■□□□□ 0.97
SPAST-204ENST00000621856 CCDC106Q9BWC9 280 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms