RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ARL4CP56559 192 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 PDIA2Q13087 525 aaKnown RBP14.07□□□□□ -0.16
CBWD3-217ENST00000621474 PERM1Q5SV97 790 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 UNC5AQ6ZN44 842 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 CENPUQ71F23 418 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 AMZ2Q86W34 360 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 CILP2Q8IUL8 1156 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 SFRP1Q8N474 314 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 LRRC39Q96DD0 335 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 DCUN1D1Q96GG9 259 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 SCHIP1Q9P0W5 487 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-217ENST00000621474 WDR37Q9Y2I8 494 aa14.07□□□□□ -0.16
CBWD3-217ENST00000621474 DNMT3AQ9Y6K1 912 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-217ENST00000621474 KNTC1P50748 2209 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 CFAP99D6REC4 459 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 NDC80O14777 642 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 POLBP06746 335 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 F3P13726 295 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 PAMP19021 973 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 RPL10P27635 214 aaKnown RBP14.06□□□□□ -0.16
CBWD3-217ENST00000621474 ECHS1P30084 290 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 TTPAP49638 278 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 DAB2P98082 770 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 GUCY2DQ02846 1103 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 NR0B2Q15466 257 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 LONRF1Q17RB8 773 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 C14orf28Q4W4Y0 310 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 ZNF789Q5FWF6 425 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 N4BP2L1Q5TBK1 243 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-217ENST00000621474 STEAP4Q687X5 459 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 NEPROQ6NW34 567 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 ANKMY2Q8IV38 441 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 DENND6AQ8IWF6 608 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.06□□□□□ -0.16
CBWD3-217ENST00000621474 OR2L2Q8NH16 312 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 SLC37A2Q8TED4 501 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.06□□□□□ -0.16
CBWD3-217ENST00000621474 BIRC8Q96P09 236 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 NAT9Q9BTE0 207 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 P2RY12Q9H244 342 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 OSGEPL1Q9H4B0 414 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 PADI4Q9UM07 663 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 NCOR2Q9Y618 2525 aa14.06□□□□□ -0.16
CBWD3-217ENST00000621474 MGAT4DA6NG13 374 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 SNX2O60749 519 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 AP2A2O94973 939 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 TTC4O95801 387 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 OGNP20774 298 aaKnown RBP14.05□□□□□ -0.16
CBWD3-217ENST00000621474 KCNA4P22459 653 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 PBLDP30039 288 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-217ENST00000621474 DEKP35659 375 aaKnown RBP14.05□□□□□ -0.16
CBWD3-217ENST00000621474 SLC1A2P43004 574 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 SEPT7Q16181 437 aaKnown RBP14.05□□□□□ -0.16
CBWD3-217ENST00000621474 GLE1Q53GS7 698 aaKnown RBP14.05□□□□□ -0.16
CBWD3-217ENST00000621474 AARS2Q5JTZ9 985 aaKnown RBP14.05□□□□□ -0.16
CBWD3-217ENST00000621474 LYPLAL1Q5VWZ2 237 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 METRNLQ641Q3 311 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 ZNF470Q6ECI4 717 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 TRMT10BQ6PF06 316 aaKnown RBP14.05□□□□□ -0.16
CBWD3-217ENST00000621474 IYDQ6PHW0 289 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 KCNMB4Q86W47 210 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 ARL14Q8N4G2 192 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 FBXO36Q8NEA4 188 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 LKAAEAR1Q8TD35 194 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 LPGAT1Q92604 370 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 EPB41L5Q9HCM4 733 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 NCKIPSDQ9NZQ3 722 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 ZC3H7BQ9UGR2 993 aaKnown RBP14.05□□□□□ -0.16
CBWD3-217ENST00000621474 WASF3Q9UPY6 502 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 PCDHGA1Q9Y5H4 931 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 RNF215Q9Y6U7 377 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 CELSR3Q9NYQ7 3312 aa14.05□□□□□ -0.16
CBWD3-217ENST00000621474 C17orf113A0A1B0GUU1 675 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 IQCF5A8MTL0 148 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 PPM1DO15297 605 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 NUDT21O43809 227 aaKnown RBP14.04□□□□□ -0.16
CBWD3-217ENST00000621474 KCNJ13O60928 360 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 RFPL3O75679 317 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 GP1BAP07359 652 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 ERVK-10P10266 1014 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 FASLGP48023 281 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 CTBP1Q13363 440 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 CLCA4Q14CN2 919 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 HSP90AA5PQ58FG0 334 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 SPANXN3Q5MJ09 141 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 CTSL3PQ5NE16 218 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 MRNIPQ6NTE8 343 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 ABRAXAS1Q6UWZ7 409 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 WASH2PQ6VEQ5 465 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 CCNJLQ8IV13 435 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 CNTN4Q8IWV2 1026 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 ZBED8Q8IZ13 594 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 IFI44Q8TCB0 444 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 WASH6PQ9NQA3 447 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 C20orf96Q9NUD7 363 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-217ENST00000621474 ZNF624Q9P2J8 865 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-217ENST00000621474 TRBV23OR9-2A0A075B6M9 112 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 CPED1A4D0V7 1026 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 OR52A4PA6NMU1 304 aa14.04□□□□□ -0.16
CBWD3-217ENST00000621474 PRMT5O14744 637 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms