RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 COPG1Q9Y678 874 aaKnown RBP9.81□□□□□ -0.84
VTA1-205ENST00000620996 ANKRD12Q6UB98 2062 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 CDK14O94921 469 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 CYLC2Q14093 348 aaPredicted RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 CDKN3Q16667 212 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 DUSP6Q16828 381 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 MMEL1Q495T6 779 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 FAM91A1Q658Y4 838 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 SERPINA13PQ6UXR4 307 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 GK5Q6ZS86 529 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 HSD11B1LQ7Z5J1 315 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 RBM12BQ8IXT5 1001 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 ULK2Q8IYT8 1036 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 TUBGCP3Q96CW5 907 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 TRMOQ9BU70 441 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 FBRSL1Q9HCM7 1045 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 ELOVL2Q9NXB9 296 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 GALNT8Q9NY28 637 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 CCDC167Q9P0B6 97 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 WASF2Q9Y6W5 498 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 NOTCH4Q99466 2003 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 OTOL1A6NHN0 477 aaPredicted RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 EPOPA6NHQ4 379 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 PRRT4C9JH25 899 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 PIP5K1BO14986 540 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 INPP4BO15327 924 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 LINC01565O15544 149 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 CCNT2O60583 730 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 TSPAN12O95859 305 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 CTSLP07711 333 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 DGKAP23743 735 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 WASP42768 502 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 SPINT3P49223 89 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 ART3Q13508 389 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 TGFBIQ15582 683 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 GPR33Q49SQ1 333 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 AGKQ53H12 422 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 HABP4Q5JVS0 413 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 LYPLAL1Q5VWZ2 237 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 METTL21CQ5VZV1 264 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 BRAT1Q6PJG6 821 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 CLYBLQ8N0X4 340 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 TWIST2Q8WVJ9 160 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 WDR60Q8WVS4 1066 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 RCN3Q96D15 328 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 ECHDC3Q96DC8 303 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 MRGPRX3Q96LB0 322 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 ASB16Q96NS5 453 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 FAM83DQ9H4H8 585 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 THG1LQ9NWX6 298 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 WWOXQ9NZC7 414 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 ZMYM5Q9UJ78 669 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 MTCL1Q9Y4B5 1905 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 OR2AG2A6NM03 316 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 UPK3BL1B0FP48 263 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 WASH3PC4AMC7 463 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 UPK3BL2E5RIL1 263 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 PFDN1O60925 122 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 ELFN1P0C7U0 828 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 THRAP10827 490 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 PBLDP30039 288 aaPredicted RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 PRDX3P30048 256 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 VIPR1P32241 457 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 NSG1P42857 185 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 HK3P52790 923 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 METAP1P53582 386 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 ATXN3P54252 364 aaPredicted RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 STX1BP61266 288 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 LCP2Q13094 533 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 RPS6KA2Q15349 733 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 TTLL9Q3SXZ7 439 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 TANGO2Q6ICL3 276 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 CDYL2Q8N8U2 506 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 PPP2R3CQ969Q6 453 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 HBEGFQ99075 208 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 KXD1Q9BQD3 176 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 CCDC28BQ9BUN5 200 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 RIOK2Q9BVS4 552 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 SLC2A11Q9BYW1 496 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 ZDHHC3Q9NYG2 299 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 NOP53Q9NZM5 478 aaKnown RBP9.8□□□□□ -0.84
VTA1-205ENST00000620996 COQ6Q9Y2Z9 468 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 ASB1Q9Y576 335 aa9.8□□□□□ -0.84
VTA1-205ENST00000620996 A0A1B0GTL3 188 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 C16orf96A6NNT2 1141 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 C9JVG2 144 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 RAD51BO15315 384 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 OR56A5P0C7T3 313 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 GM2AP17900 193 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 MSH3P20585 1137 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 NFKBIAP25963 317 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 HSPA7P48741 367 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 NFKB2Q00653 900 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 TBL3Q12788 808 aaKnown RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 MYBPC3Q14896 1274 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 GRIN2CQ14957 1233 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 ZNF284Q2VY69 593 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 TCHHL1Q5QJ38 904 aaPredicted RBP9.79□□□□□ -0.84
VTA1-205ENST00000620996 GPRC6AQ5T6X5 926 aa9.79□□□□□ -0.84
VTA1-205ENST00000620996 ERAP2Q6P179 960 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms